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Series GSE264546 Query DataSets for GSE264546
Status Public on May 03, 2024
Title RNA-seq analyses of periodontal tissue and liver of periodontitis-affected mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Background/purpose
Periodontal diseases exacerbate hepatic inflammation and diseases like non-alcoholic fatty liver disease via circulating pathogenic factors from periodontal tissue. Long-term pre-symptomatic state eventually leads to the development of such hepatic diseases. However, it is uncertain if periodontitis contributes in the onset of hepatic pre-symptomatic state. Herein, we conducted a hepatic whole transcription analysis of periodontitis-affected mice and healthy mice to understand the early functional changes in the hepatic system in periodontitis-affected mice.
Materials and methods
Silk ligatures were tied around mice second maxillary molars for 14 days to develop periodontitis. RNA-seq samples were collected from periodontal tissues and liver tissues of mice with periodontitis and healthy mice. Lipidomic analysis of hepatic omega-3 fatty acids in periodontitis-affected and healthy mice was conducted. The anti-inflammatory effects of omega-3 fatty acids and their metabolites were elucidated using hepatocytes HepG2 cells.
Results
In the liver of mice with periodontitis, genes coding for cytochrome P450 such as Cyp4a12a and Cyp4a12b were identified as significantly down-regulated genes. Lipidomic analyses identified that epoxidation and subsequent hydrolysis of hepatic omega-3 fatty acids were inhibited in periodontitis-affected mice. Eicosapentaenoic acid metabolites, epoxy eicosatetraenoic acid and dihydroxyeicosatetraenoic acid, inhibited inflammatory responses of HepG2 cells.
Conclusion
These results suggest that, in the liver of periodontitis-affected mice, due to the reduced activity of omega-3 fatty acid epoxidation, pre-symptomatic state with pro-inflammatory status develop. Therefore, early intervention of periodontitis might contribute to the prevention of the onset of hepatic diseases.

 
Overall design Gene expression analysis in periodontal tissue and liver tissue of periodontitis-affected and healthy mice
 
Contributor(s) Suzuki S
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Submission date Apr 22, 2024
Last update date May 03, 2024
Contact name Shigeki Suzuki
Organization name Tohoku University Graduate School of Dentistry
Department Department of Periodontology and Endodontology
Street address 4-1, Seiryo-machi, Aoba-ku
City Sendai
State/province Miyagi
ZIP/Postal code 9808575
Country Japan
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (4)
GSM8219814 Liv_perio
GSM8219815 Liv_cont
GSM8219816 Perio_perio
Relations
BioProject PRJNA1103128

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE264546_perio_liver_circadian_raw-Genes_diffOutput_condenseGenes_GEO.xlsx 9.7 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA

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