NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE254667 Query DataSets for GSE254667
Status Public on May 01, 2024
Title Intestinal NSD2 aggravates hepatic steatosis during obesity through histone modifications [RNA-seq]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The impairment of the intestinal barrier will lead to the accumulation of fat and harmful substances in the liver, inducing hepatic steatosis or steatohepatitis. Zhang et al. identified NSD2 in the intestine as a novel and essential regulator of hepatic steatosis. NSD2 directly regulates transcriptional activation of ERN1 through the modification of H3 dimethylated on lysine 36 (H3K4me36), thereby activating the ERN1-JNK axis to induce inflammatory response, intestinal barrier impairment, and hepatic steatosis. This functional mechanism of NSD2 provides a potential therapeutic target for this disease.
 
Overall design Intestinal-specific NSD2 disruption mice (NSD2∆IE) and controls (NSD2fl/fl) were treated with a 16-week HFCD diet, and colon tissues were collected for further study, with three replicate samples per group
 
Contributor(s) Zhang Y, Peng L
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jan 31, 2024
Last update date May 01, 2024
Contact name YIJIA ZHANG
E-mail(s) a15215572002@icloud.com
Phone 15215572002
Organization name Beijing University of Chemical Technology
Street address 和平街道
City 北京市
ZIP/Postal code 100029
Country China
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (6)
GSM8048162 NSD2fl/fl RNA-seq 1
GSM8048163 NSD2fl/fl RNA-seq 2
GSM8048164 NSD2fl/fl RNA-seq 3
Relations
BioProject PRJNA1071485

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE254667_RAW.tar 1.8 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap