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Series GSE248413 Query DataSets for GSE248413
Status Public on May 01, 2024
Title Single-nucleus transcriptomic sequencing of aging hypothalamus treated with 17a-estradiol
Organism Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary To dissect the role of 17a-estradiol in lifespan extending and its potential side effects for long-term administration, the pooled hypothalami from aging male Norway brown rats treated with 17a-estradiol for 6 months (O.T), aged male control (O), and young male control (Y) were subjected to single-nucleus transcriptomic sequencing (snRNA-seq).
 
Overall design 24-month-old-male Norway brown rats were fed freely with diet mixed with 17a-estradiol at a dose of 14.4 milligrams per kilogram diet (14.4 ppm) starting at 24 months of age for six months (O.T). 30-month-old-male rats and 4-month-old-male rats were used as aging control (O) and young sample control (Y) respectively. All rats had ad libitum access to food and water. The intact hypothalami in each group were pooled for nucleus isolation and snRNA-seq.
 
Contributor(s) Li Y, Ji S
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Submission date Nov 21, 2023
Last update date May 01, 2024
Contact name Yinchuan Li
E-mail(s) 18622397604@163.com, yinchuanli@aliyun.com
Organization name Nantong University
Department Medical School
Street address 16 wenfeng road, Chongchuan
City Nantong
State/province Jiangsu
ZIP/Postal code 226001
Country China
 
Platforms (1)
GPL22396 Illumina HiSeq 4000 (Rattus norvegicus)
Samples (3)
GSM7913148 O, snRNA-seq
GSM7913149 O.T, snRNA-seq
GSM7913150 Y, snRNA-seq
Relations
BioProject PRJNA1043710

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE248413_RAW.tar 79.0 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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