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Series GSE242297 Query DataSets for GSE242297
Status Public on Jan 02, 2024
Title Transcriptome reprogramming through alternative splicing triggered by apigenin drives cell death in triple negative breast cancer
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Apigenin reprogrammes the transcriptome of TNBC through alternative splicing thereby exerting anti-proliferative and pro-apoptotic activities. Our findings underscore the potential impact of nutraceuticals for improved TNBC prevention and treatment.
 
Overall design Comparative alternative splciing analyses of RNA-seq data for triple negative breast cancer MDA-MB-231 cells treated with vehicle or apigenin (DMSO, Api). Twp biological replicates analyzed for both conditions.
 
Contributor(s) Doseff AI, Arango D
Citation(s) 38092740
Submission date Sep 05, 2023
Last update date Jan 02, 2024
Contact name Andrea Doseff
E-mail(s) doseffan@msu.edu
Organization name Michigan State University
Department BPS
Lab Andrea Doseff
Street address 4153 BPS, 567 Wilson Rd
City East Lansing
State/province Michigan
ZIP/Postal code 48824
Country USA
 
Platforms (1)
GPL28038 DNBSEQ-G400 (Homo sapiens)
Samples (6)
GSM7757814 MDAMB231_DMSO_1
GSM7757815 MDAMB231_DMSO_2
GSM7757816 MDAMB231_DMSO_3
Relations
BioProject PRJNA1013051

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE242297_TPM_allsamples.xlsx 8.1 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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