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Series GSE2393 Query DataSets for GSE2393
Status Public on Mar 10, 2005
Title Expression patterns throughout disease progression and impact on neuroAIDS.
Platform organism Homo sapiens
Sample organism Macaca mulatta
Experiment type Expression profiling by array
Summary The virus/host interactions during the acute phase of human immunodeficiency virus (HIV) infection help determine the course of disease. During this time period, virus enters the brain. Here, we report clusters of genes whose transcripts are significantly upregulated in the frontal lobe of the brain during acute simian immunodeficiency virus (SIV) infection of rhesus monkeys. Many of these genes are involved in interferon (IFN) and/or interleukin (IL)-6 pathways. Although neither IFNa nor IFN? are elevated in the brain, IL6 is increased. Both IFNa and IL6 are elevated in plasma during this acute phase. The upregulation of STAT1, verified by immunohistochemical staining, can be due to both central nervous system (CNS) (SIV and IL6) and peripheral (IFNa and IL6) causes, and can itself drive the expression of many of these genes. Examination of the levels of expression of the upregulated genes in the post-acute and long-term phases of infection, as well as in SIV encephalitis, reveals increased expression throughout SIV infection, which may serve to protect the brain, but can have untoward long-term consequences.
Keywords = HIV dementia
Keywords = Gene array
Keywords = Cytokine
Keywords = Simian immunodeficiency virus
Keywords: other
 
Web link http://www.scripps.edu/researchservices/dna_array/
 
Contributor(s) Head SR, Roberts E, Burudi EM, Flynn C, Madden LJ, Roinick KL, Watry DD, Zandonatti MA, Taffe MA, Fox HS, Henriksen SJ
Citation(s) 15579284
Submission date Mar 09, 2005
Last update date Dec 13, 2018
Contact name Steven Head
E-mail(s) shead@scripps.edu
Phone 858 784-2263
Organization name The Scripps Research Institute
Street address 10550 N Torrey Pines Rd
City La Jolla
State/province CA
ZIP/Postal code 92037
Country USA
 
Platforms (1)
GPL8300 [HG_U95Av2] Affymetrix Human Genome U95 Version 2 Array
Samples (34)
GSM44870 013102_HF_289FL
GSM44871 020102_HF_289FL
GSM44872 020602_HF_301FL
Relations
BioProject PRJNA91145

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Supplementary file Size Download File type/resource
GSE2393_RAW.tar 93.0 Mb (http)(custom) TAR (of CEL, EXP)

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