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Series GSE236410 Query DataSets for GSE236410
Status Public on May 14, 2024
Title Inflammatory Alterations to Renal Lymphatic Endothelial Cell Gene Expression in Mouse Models of Hypertension
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To evaluate the specific changes that renal LECs undergo in hypertension (HTN), we performed single-cell RNA sequencing. Using the angiotensin II-induced and salt-sensitive mouse models of HTN, we isolated renal CD31+ and podoplanin+ cells from hypertensive and normotensive mice. Sequencing of these cells revealed three distinct cell types (LECs, myeloid immune cells, and an unusual third population we dubbed multipotent nephron-associated support cells) with unique expression profiles.
 
Overall design Mice underwent the angiotensin-II and salt sensitive models of hypertension and had their kidneys removed and aggregated per group (A2 HTN, A2 control, SS HTN, SS control). Kidneys were digested and turned to a single-cell suspension, followed by the isolation of CD31+ and podoplanin+ cells by magnetic separation. We sought to investigate the effects of hypertension on CD31+/podoplanin+ renal lymphatic endothelial cells and to investigate model-specific differences.
 
Contributor(s) McDermott JG, Goodlett BL, Creed HA, Navaneethabalakrishnan S, Rutkowski JM, Mitchell BM
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Submission date Jul 03, 2023
Last update date May 14, 2024
Contact name Brett Mitchell
Organization name Texas A&M University
Department Medical Physiology
Lab Mitchell
Street address 8441 Riverside Pkwy
City Bryan
State/province TX
ZIP/Postal code 77807
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (4)
GSM7532593 A2 HTN
GSM7532598 A2 Ctrl
GSM7532602 SS HTN
Relations
BioProject PRJNA990767

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE236410_a2htn_counts.csv.gz 4.9 Mb (ftp)(http) CSV
GSE236410_ctrl_counts.csv.gz 4.5 Mb (ftp)(http) CSV
GSE236410_htn_counts.csv.gz 9.6 Mb (ftp)(http) CSV
GSE236410_sshtn_counts.csv.gz 4.9 Mb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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