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Series GSE23341 Query DataSets for GSE23341
Status Public on Jul 28, 2011
Title Expression data from WT and GABPalpha-deficient Flt3(-) LSK cells
Organism Mus musculus
Experiment type Expression profiling by array
Summary GABPalpha is an Ets family transcription factor and involved in regulation of both basic cellular functions such as cell cycle progression and tissue-specific biological processes. We found that GABPalpha is critically required for survival and differentiation of hematopoietic stem cells.
We used microarrays to detect gene expression changes in Flt3(-) LSK cells (which contains both long-term and short-term hematopoietic stem cells) by GABPalpha deficiency.
 
Overall design Mx1Cre-GABPa(FL/+) and Mx1Cre-GABPa(FL/-) mice were treated with pIpC to induce inactivation of GABPalpha in bone marrow cells. Four days after last treatment of pIpC, the bone marrow cells were isolated and the Flt3(-)LSK subset was purified by cell sorting. RNA was extracted and hybridized to GeneChip Mouse GENE 1.0 ST arrays (Affymetrix).
 
Contributor(s) Xue H, Yu S
Citation(s) 21139080
Submission date Jul 30, 2010
Last update date Mar 04, 2019
Contact name Hai-Hui Xue
E-mail(s) haihui.xue@hmh-cdi.org
Organization name Hackensack University Medical Center
Department Center for Discovery and Innovation
Street address 111 Ideation Way
City Nutley
State/province NJ
ZIP/Postal code 07110
Country USA
 
Platforms (1)
GPL6246 [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]
Samples (4)
GSM572786 control HSCs rep1
GSM572787 control HSCs rep2
GSM572788 GABPalpha-deficient HSCs rep1
Relations
BioProject PRJNA131479

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE23341_RAW.tar 16.4 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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