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Series GSE23334 Query DataSets for GSE23334
Status Public on Oct 18, 2010
Title Active Creb3L1 can upregulate secretory pathway genes in HeLa cells
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Abstract: Secretion occurs in all cells, with relatively low levels in most cells and extremely high levels in specialized secretory cells, such as those of the pancreas, salivary and mammary glands. Here, we report that the CrebA/Creb3-like family of bZip transcription factors functions to upregulate expression of both the general protein machinery required in all cells for secretion and of cell-type specific secreted proteins. Drosophila CrebA directly binds the enhancers of secretory pathway genes and is both necessary and sufficient to activate expression of every secretory pathway component gene examined thus far. Microarray profiling reveals that CrebA also upregulates expression of genes encoding cell type specific secreted components. Finally, we find that the human CrebA orthologues, Creb3L1 and Creb3L2, have the ability to upregulate the secretory pathway in non-secretory cell types.
Goals: Creb3L1 is the closest related human orthologue of Drosophila CrebA. CrebA is required to upregulate genes encoding the protein machinery and cargo in specialized secretory cells. To determine if the human orthologues of CrebA, Creb3L1 and Creb3L2, perform the same function, we expressed the truncated active form of Creb3L1 in non-secretory HeLa cells. We then performed microarray experiments and found that active Creb3L1 is sufficient to upregulate genes encoding the protein machinery of the secretory pathway, as observed with Drosophila CrebA.
 
Overall design HeLa cells were transiently co-transfected with truncated Creb3L1 (Creb3L1 T) and GFP. Following 20 hours in culture, GFP positive cells were isolated by FACS and RNA was extracted using the Rneasy kit (Qiagen). As a control, mock transfected cells were also subjected to cell sorting and RNA was extracted using the same protocols. At least three replicates were obtained for each group.
 
Contributor(s) Fox RM, Hanlon CD, Andrew DJ
Citation(s) 21041443, 32613751
Submission date Jul 30, 2010
Last update date Jun 03, 2021
Contact name Deborah J Andrew
E-mail(s) dandrew@jhmi.edu
Organization name Johns Hopkins University School of Medicine
Department Cell Biology
Street address 725 N. Wolfe St., Hunterian G-1
City Baltimore
State/province MD
ZIP/Postal code 21205
Country USA
 
Platforms (1)
GPL6244 [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version]
Samples (6)
GSM572666 Wild type 1
GSM572667 Wild type 2
GSM572668 Wild type 3
This SubSeries is part of SuperSeries:
GSE23349 The CrebA/Creb3-like transcription factors are major and direct regulators of secretory capacity
Relations
BioProject PRJNA133299

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE23334_RAW.tar 23.7 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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