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Series GSE230237 Query DataSets for GSE230237
Status Public on May 17, 2024
Title Generation of immune-enhancing neutrophils by subclinical super-low dose LPS
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We have generated immune-enhancing neutrophils by culturing murine primary bone marrow derived neutrophils with either super-low dose of LPS. Immune-enhancing neutrophils preferentially express co-stimulatory molecules such as CD74, CD44 and CD86, and exhibit reduced expression of CD11b. Purified bone marrow neutrophils were treated with PBS or 100 pg/ml LPS overnight in the presence of GM-CSF, and harvested for scRNAseq analysis to examine their profiles of gene expression.
 
Overall design WT murine neutrophils were stimulated by GM-CSF, and then treated with either PBS or LPS overnight
 
Contributor(s) Zhang Y, YI Z, Geng S, Li L
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Submission date Apr 21, 2023
Last update date May 18, 2024
Contact name Liwu Li
E-mail(s) lwli@vt.edu
Organization name Virginia Tech
Street address 1015 Life Science Cir
City Blacksburg
State/province VA
ZIP/Postal code 24060
Country USA
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (2)
GSM7208477 WT PBS neutrophil
GSM7208478 WT low dose LPS neutrophil
Relations
BioProject PRJNA958103

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE230237_RAW.tar 6.1 Mb (http)(custom) TAR (of RDS)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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