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Series GSE227775 Query DataSets for GSE227775
Status Public on Nov 28, 2023
Title Modeling myelodysplastic syndromes in mice by altered Hoxa1 spliceform expression (CMP)
Organism Mus musculus
Experiment type Expression profiling by array
Summary The homeobox gene, Hoxa1, has two different isoforms generated by alternative splicing: a full-length homeodomain-containing Hoxa1 (Hoxa1-FL), and a truncated Hoxa1 (Hoxa1-T), that lacks the homeodomain. Oncoretroviral overexpression of wildtype Hoxa1 cDNA (WT-Hoxa1), which generates both Hoxa1 isoforms, in murine hematopoietic stem and progenitor cells (HSPCs) perturbed hematopoiesis, resulting in myelodysplastic syndromes (MDS) in mice. Overexpression of a mutated Hoxa1 cDNA (MUT-Hoxa1) that generates Hoxa1-FL but not Hoxa1-T led to a more severe MDS capable of transforming to secondary acute myeloid leukemia (sAML). Similar to human MDS, DNA damage repair pathways were downregulated in Hoxa1-overexpressing hematopoietic progenitor cells. Conditional knock-in mouse models revealed a Hoxa1-FL dosage-dependent effect on MDS disease severity. Our data reveal that increased expression of Hoxa1-FL in HSPCs is sufficient to initiate MDS in mice. CD34+ cells from up to 50% of patients with MDS had elevated HOXA1-FL expression, highlighting the clinical relevance of our mouse models.
 
Overall design Three vector groups (MXIE, WT-Hoxa1 and MUT-Hoxa1) were compared.
Web link https://www.biorxiv.org/content/10.1101/2023.04.24.538176v1
 
Contributor(s) Joseph C, Hendy J, Baker EK, Chalk AM, Gudas LJ, Fabb SA, Wall M, Walkley CR, Purton LE
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Submission date Mar 20, 2023
Last update date Nov 29, 2023
Contact name Alistair Morgan Chalk
E-mail(s) achalk@svi.edu.au, alistair.chalk@gmail.com
Organization name St Vincent's Institute of Medical Research
Department Stem Cell Regulation Unit
Lab Walkley
Street address 9 Princes st, Fitzroy
City Melbourne
State/province VIC
ZIP/Postal code 3065
Country Australia
 
Platforms (1)
GPL11533 [MoGene-1_1-st] Affymetrix Mouse Gene 1.1 ST Array [transcript (gene) version]
Samples (11)
GSM7108007 CMP (group A) Hoxa1
GSM7108008 CMP (group B) Hoxa1
GSM7108009 CMP (group D) Hoxa1
Relations
BioProject PRJNA946799

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE227775_RAW.tar 42.2 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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