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Series GSE224124 Query DataSets for GSE224124
Status Public on Apr 24, 2024
Title Whole-Genome Methylation Profiling Reveals Regions Associated with Painful Temporomandibular Disorders and Active Recovery Processes
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary Genome wide DNA methylation profiling of samples with/without chronic or acute Temporomandibular Disorders (TMD). The Illumina Infinium Human methylationEPIC Beadchip was used to obtain DNA methylation profiles across 1,051,943 CpGs in TMD samples. Samples included 452 non-TMD and 496 chronic TMD from OPPERA I, 36 healthy and 123 acute TMD from OPPERA II.
 
Overall design Bisulphite converted DNA from the 1107 samples were hybridised to the Illumina Infinium Human MethylationEPIC Beadchip
 
Contributor(s) Diatchenko L, Smith S, Ao X, Parisien M
Citation(s) 38015635
Submission date Jan 31, 2023
Last update date Apr 25, 2024
Contact name Luda Diatchenko
E-mail(s) luda.diatchenko@mcgill.ca
Organization name McGill University
Department Faculty of Dental Medicine and Oral Health Sciences
Lab Human Pain Genetics Lab
Street address 3775 University Street
City Montreal
State/province Quebec
ZIP/Postal code H3A 2B4
Country Canada
 
Platforms (1)
GPL21145 Infinium MethylationEPIC
Samples (1107)
GSM7012530 OPPERA_methylation 204873630100_R01C01
GSM7012531 OPPERA_methylation 204873630100_R02C01
GSM7012532 OPPERA_methylation 204873630100_R05C01
Relations
BioProject PRJNA929950

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE224124_OPPERA_matrix_processed_revised.csv.gz 6.7 Gb (ftp)(http) CSV
GSE224124_RAW.tar 15.3 Gb (http)(custom) TAR (of IDAT)
Processed data are available on Series record
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