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GEO accession:
Series GSE216197
Query DataSets for GSE216197
Status
Public on Feb 02, 2024
Title
Let-7 miRNAs repress HIC2 to regulate BCL11A transcription and hemoglobin switching
Organism
Homo sapiens
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
38364109
Submission date
Oct 20, 2022
Last update date
Mar 29, 2024
Contact name
Peng Huang
E-mail(s)
waliays@gmail.com
Organization name
Guangzhou Medical University
Department
GMU-GIBH Joint School of Life Sciences
Lab
Peng Huang
Street address
Xinzao, Panyu District
City
Guangzhou
State/province
Guangdong
ZIP/Postal code
511436
Country
China
Platforms (1)
GPL30173
NextSeq 2000 (Homo sapiens)
Samples (26)
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GSM6661402
Scramble control ATAC-seq rep1
GSM6661403
Scramble control ATAC-seq rep2
GSM6661404
Let-7 KD ATAC-seq rep1
GSM6661405
Let-7 KD ATAC-seq rep2
GSM6661420
Scramble control rep1 [Capture-C]
GSM6661421
Scramble control rep2 [Capture-C]
GSM6661422
Scramble control rep3 [Capture-C]
GSM6661423
Scramble control rep4 [Capture-C]
GSM6661424
Let-7 KD rep1 [Capture-C]
GSM6661425
Let-7 KD rep2 [Capture-C]
GSM6661426
Let-7 KD rep3 [Capture-C]
GSM6661427
Let-7 KD rep4 [Capture-C]
GSM6661428
Input scramble control
GSM6661429
Input let-7 KD
GSM6661430
Scramble control GATA1 ChIP-seq rep1
GSM6661431
Let-7 KD GATA1 ChIP-seq rep1
GSM6661432
Scramble control GATA1 ChIP-seq rep2
GSM6661433
Let-7 KD GATA1 ChIP-seq rep2
GSM6661434
Scramble control HIC2 ChIP-seq rep1
GSM6661435
Let-7 KD HIC2 ChIP-seq rep1
GSM6661436
Scramble control HIC2 ChIP-seq rep2
GSM6661437
Let-7 KD HIC2 ChIP-seq rep2
GSM6661438
Scramble control RNA-seq rep1
GSM6661439
Scramble control RNA-seq rep2
GSM6661440
Let-7 KD RNA-seq rep1
GSM6661441
Let-7 KD RNA-seq rep2
This SuperSeries is composed of the following SubSeries:
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GSE216190
Let-7 miRNAs repress HIC2 to regulate BCL11A transcription and hemoglobin switching [ATAC-Seq]
GSE216194
Let-7 miRNAs repress HIC2 to regulate BCL11A transcription and hemoglobin switching [Capture-C]
GSE216195
Let-7 miRNAs repress HIC2 to regulate BCL11A transcription and hemoglobin switching [ChIP-Seq]
GSE216196
Let-7 miRNAs repress HIC2 to regulate BCL11A transcription and hemoglobin switching [RNA-Seq]
Relations
BioProject
PRJNA892533
Download family
Format
SOFT formatted family file(s)
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Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE216197_RAW.tar
3.0 Gb
(http)
(custom)
TAR (of BIGWIG, TSV)
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