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Series GSE2042 Query DataSets for GSE2042
Status Public on Dec 21, 2005
Title Apoptosis and differentiation commitment:novel insights revealed by gene profiling studies in mouse Embryonic Stem cells
Organism Mus musculus
Experiment type Expression profiling by array
Summary Mouse embryonic stem (ES) cells remain pluripotent in vitro when grown in presence of Leukaemia Inhibitory Factor (LIF). LIF starvation leads to apoptosis of some of the ES-derived differentiated cells, together with p38a MAP kinase activation. Apoptosis, but not morphological cell differentiation, is blocked by a p38 inhibitor, PD 169316. To further understand the mechanism of action of this compound, we have identified its specific targets by microarray studies. We report on the global expression profiles of genes expressed at three days upon LIF withdrawal (d3) compared to pluripotent cells and of genes whose expression is modulated at d3 under anti-apoptotic conditions. We showed that at d3 without LIF cells express, earlier than anticipated, specialized cell markers and that when the apoptotic process was impaired, expression of differentiation markers was altered. In addition, functional tests revealed properties of anti-apoptotic proteins not to alter cell pluripotency and a novel role for metallothionein 1 gene which prevents apoptosis of early differentiated cells.

Keywords: mouse ES cells; apoptosis; differentiation; p38; PD169316;
Ca++ binding proteins; Metallothionein; stress-response
Keywords: ordered
 
 
Contributor(s) Duval D, Trouillas M, Thibault C, Dembele D, Diemunsch F, Reinhardt B, Mertz A, Dierich A, Boeuf H
Citation(s) 16311515, 18437159
Submission date Dec 06, 2004
Last update date Feb 18, 2018
Contact name Helene BOEUF
E-mail(s) helene.boeuf@u-bordeaux2.fr
Phone 05 57 57 46 33
Organization name UMR-CNRS-5164-CIRID
Street address
City BORDEAUX
ZIP/Postal code 33076
Country France
 
Platforms (2)
GPL32 [MG_U74A] Affymetrix Murine Genome U74A Array
GPL81 [MG_U74Av2] Affymetrix Murine Genome U74A Version 2 Array
Samples (13)
GSM37104 D4_d3
GSM37105 D4_d3PD
GSM37106 S1_d3a1
Relations
BioProject PRJNA91871

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE2042_RAW.tar 37.6 Mb (http)(custom) TAR (of CEL, EXP)

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