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Series GSE20276 Query DataSets for GSE20276
Status Public on Feb 11, 2010
Title Silencing of C2TA reveals the autonomous role of medullary thymic epithelial cells in central CD4 T cell tolerance
Organism Mus musculus
Experiment type Expression profiling by array
Summary [original title] Tissue-specific silencing of C2TA reveals the autonomous role of medullary thymic epithelial cells in central CD4 T cell tolerance.

Medullary thymic epithelial cells (mTECs) serve an essential function in central tolerance through expressing peripheral tissue-antigens. Because these antigens may be transferred to and presented by Dendritic Cells, it is unclear whether, besides being an ‘antigen reservoir’, mTECs also fulfill a critical antigen presenting cellfunction. We found that reducing MHC class II-levels on mTECs through transgenic expression of a C2TA-specific ‘designer miRNA’ resulted in an enlarged polyclonal CD4 single-positive compartment. Less CD4+ thymocytes specific for model-antigens expressed in mTECs were deleted, whereas more antigen-specific Foxp3+ regulatory T cells (Treg) emerged. Our data suggest a substantial autonomous contribution of mTECs to both dominant and recessive mechanisms of CD4 T cell tolerance and support an avidity model of Treg development versus deletion.
 
Overall design Three conditions: Wild-type, C2TA knockdown, and C2TA knock-out. For each condition three replicates and in total 9 arrays.
 
Contributor(s) Hinterberger M, Aichinger M, Voehringer D, Prazeres da Costa O, Hoffmann R, Klein L
Citation(s) 20431619
Submission date Feb 10, 2010
Last update date Mar 04, 2019
Contact name Maria Hinterberger
E-mail(s) maria.hinterberger@med.uni-muenchen.de
Organization name LMU
Department Institut für Immunologie
Lab AG Klein
Street address Goethestr. 31
City Munich
ZIP/Postal code 80336
Country Germany
 
Platforms (1)
GPL6246 [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]
Samples (9)
GSM508412 C2TA wild-type_1
GSM508413 C2TA wild-type_2
GSM508414 C2TA wild-type_3
Relations
BioProject PRJNA125365

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE20276_RAW.tar 30.7 Mb (http)(custom) TAR (of CEL)
GSE20276_SAM_complete_qvalue.txt.gz 5.3 Mb (ftp)(http) TXT
Processed data included within Sample table

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