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Series GSE20229 Query DataSets for GSE20229
Status Public on Jan 06, 2012
Title STK38 is a Key Regulator of MYC Transcriptional Activity in Human B lymphoma cells
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Post-translational regulation of the MYC Transcription Factor (TF), including its phosphorylation and ubiquitination, plays an important role in determining cell proliferation and apoptosis and has been implicated in tumorigenesis. Using a computational systems biology approach, followed by biochemical and functional validation, we have characterized the role of the STK38 kinase, an NDR family serine-threonine kinase, as a key modulator of MYC transcriptional activity in human B cells, affecting MYC protein stability in a signal-dependent fashion. Specifically, we show that in human B lymphoma ST486 cells STK38 is a key mediator of BCR pathway signaling, affecting MYC protein turnover and its phosphorylation at Ser62 in kinase-activity-dependent manner. STK38 inactivation abrogates apoptosis following BCR activation while its silencing mediates MYC protein degradation via canonical proteolytic pathways. This suggests that STK38 could provide an effective therapeutic target in MYC-dependent malignancies.
 
Overall design ST486 human Burkitt's lymphoma cells were transduced with STK38 shRNA lentiviral vectors.
 
Citation(s) 23178486
Submission date Feb 08, 2010
Last update date Dec 13, 2018
Contact name Mariano Javier Alvarez
Organization name Columbia University
Department Systems Biology
Lab Systems Biology
Street address 1130 St. Nicholas ave.
City New York
State/province NY
ZIP/Postal code 10032
Country USA
 
Platforms (1)
GPL8300 [HG_U95Av2] Affymetrix Human Genome U95 Version 2 Array
Samples (10)
GSM507075 ST486 B11-1
GSM507076 ST486 B11-2
GSM507077 ST486 B11-3
Relations
BioProject PRJNA124165

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE20229_RAW.tar 15.7 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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