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Series GSE192725 Query DataSets for GSE192725
Status Public on Jan 01, 2022
Title Integrated Genomic Analysis of Genes encoding ATP-Dependent Chromatin Remodelers Identifies CHD7 as a Potential Target for Colorectal Cancer Therapy
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary To decipher how CHD7 knockdown affects the growth of colorectal cancer cells, we undertook an unbiased genomic approach to define the transcriptional program controlled by CHD7 in RKO cells.
 
Overall design Examination of gene expression changes in CHD7 knockdown and control RKO cells.
 
Contributor(s) Zhang X
Citation(s) 35789070
Submission date Dec 29, 2021
Last update date Jul 14, 2022
Contact name Chenghao Xuan
E-mail(s) chenghaoxuan@tmu.edu.cn
Phone +862283336995
Organization name Tianjin Medical University
Street address 22 Qixiangtai Road
City Tianjin
ZIP/Postal code 300070
Country China
 
Platforms (1)
GPL28038 DNBSEQ-G400 (Homo sapiens)
Samples (4)
GSM5763672 RKO cells, vector, rep1
GSM5763673 RKO cells, vector, rep2
GSM5763674 RKO cells, shCHD7_2, rep1
Relations
BioProject PRJNA792951

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE192725_gene_count_matrix.txt.gz 233.8 Kb (ftp)(http) TXT
GSE192725_gene_fpkm_matrix.tab.gz 245.0 Kb (ftp)(http) TAB
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Raw data are available in SRA
Processed data are available on Series record

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