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Series GSE176433 Query DataSets for GSE176433
Status Public on Sep 15, 2023
Title RNA-seq analysis of WT, swo1-2 with or without salt treatment in Arabidopsis
Organism Arabidopsis
Experiment type Expression profiling by high throughput sequencing
Summary RNA-seq was performed to detect differentially expressed genes between WT and swo1 mutant under salt stress
 
Overall design Total RNAs were extracted from 7-day-old seedlings grown during long days with or without NaCl treatment for indicated time using a RNeasy Plant Mini kit (Qiagen)
 
Contributor(s) Wang Z, Peng L, Zhao C
Citation(s) 37676567
Submission date Jun 09, 2021
Last update date Sep 15, 2023
Contact name Zhidan Wang
Organization name Chinese academy of sciences
Street address Chenhua Road 3888
City Shanghai
ZIP/Postal code 201602
Country China
 
Platforms (1)
GPL27784 Illumina NovaSeq 6000 (Arabidopsis)
Samples (12)
GSM5365474 2H_CK_col-0_R1
GSM5365475 2H_CK_col-0_R2
GSM5365476 2H_CK_swo1_R1
This SubSeries is part of SuperSeries:
GSE176434 Target sites of SWO1 and their expression under salt stress
Relations
BioProject PRJNA736241
SRA SRP323332

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE176433_RPKM.xlsx 3.6 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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