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Series GSE174322 Query DataSets for GSE174322
Status Public on May 07, 2024
Title Small RNA-seq analysis of E10.5 Tbx18-expressing peri-wolffian duct stroma
Organism Mus musculus
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary The overall goal of this project is to characterize the repertoire of miRNAs in E10.5 Tbx18-expressing peri-wolffian duct stroma cells during development. To achieve this, E10.5 peri-wolffian ducts were dissected from timed-mated Tbx18-Cre;CAG-tdTomato embryos, followed by FACS sorting based on RFP expression to enrich for Tbx18-expressing cells.
 
Overall design 1X75 bp standard RNA-seq was performed using an Illumina NextSeq platform.
 
Contributor(s) Phua YL
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date May 12, 2021
Last update date May 07, 2024
Contact name Dr. Yu Leng Phua
Organization name Icahn School of Medicine at Mount Sinai
Street address 1 Gustave L. Levy Pl
City New York City
State/province New York
ZIP/Postal code 10029
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (4)
GSM5291796 Tbx18_tdTomato 1
GSM5291797 Tbx18_tdTomato 2
GSM5291798 Tbx18_tdTomato 3
Relations
BioProject PRJNA729438
SRA SRP319442

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE174322_Tbx18_TPM.txt.gz 34.8 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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