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Series GSE172203 Query DataSets for GSE172203
Status Public on May 19, 2021
Title Single nucleus RNA-seq atlas of macaque ventromedial and dorsomedial hypothalamus
Organism Macaca mulatta
Experiment type Expression profiling by high throughput sequencing
Summary To uncover the cellular architecture of the macaque ventromedial (VMH) and dorsomedial hypothalamus (DMH), we used single nucleus RNA-seq (snRNA-seq) from a Rhesus macaque
 
Overall design A 6.1 year-old Rhesus macaque had been maintained on chow prior to sacrifice and microdissection of the VMH and DMH. The VMH and DMH were then combined prior to nuclei isolation and snRNA-seq using the 10x Genomics 3’ gene expression platform.
 
Contributor(s) Rupp AC, Myers MG Jr, Kievit P
Citation(s) 34018926
Submission date Apr 16, 2021
Last update date Jun 21, 2021
Contact name Martin G Myers Jr
E-mail(s) mgmyers@umich.edu
Organization name University of Michigan
Street address 1000 Wall St
City Ann Arbor
State/province MI
ZIP/Postal code 48105
Country USA
 
Platforms (1)
GPL27943 Illumina NovaSeq 6000 (Macaca mulatta)
Samples (2)
GSM5243947 Sample_794-AA-2
GSM5243948 Sample_794-AA-3
This SubSeries is part of SuperSeries:
GSE172207 Cross-Species Analysis Defines the Conservation of Anatomically-Segregated VMH Neuron Populations
Relations
BioProject PRJNA722417
SRA SRP315083

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE172203_barcodes.tsv.gz 69.5 Kb (ftp)(http) TSV
GSE172203_features.tsv.gz 165.1 Kb (ftp)(http) TSV
GSE172203_matrix.mtx.gz 165.7 Mb (ftp)(http) MTX
GSE172203_metadata.csv.gz 109.9 Kb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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