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Series GSE16935 Query DataSets for GSE16935
Status Public on Jul 01, 2011
Title Response of the EPI-200 human 3-D skin model to high and low doses of protons
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Accumulating data suggest that the biological responses to high and low doses of radiation are qualitatively different, necessitating the direct study of low dose responses. Most such studies have utilized 2-dimensional culture systems, which may not fully represent responses in 3-dimensional tissues. To gain insight into low dose responses in tissue, we have profiled global gene expression in EPI-200, a 3-dimensional tissue model from MatTek that imitates the structure and function of human epidermis, at 4, 16 and 24 hours after exposure to high (2.5 Gy) and low (0.1 Gy) doses of low LET protons.
 
Overall design Untreated controls and samples exposed to 10 cGy or to 2.5 Gy were analyzed at three different times (4, 16 or 24 hours after exposure). Three biological repeats were performed for each condition
 
Contributor(s) Amundson SA, Mezentsev A
Citation(s) 21486161
Submission date Jul 02, 2009
Last update date Jan 23, 2019
Contact name Sally Amundson
E-mail(s) saa2108@cumc.columbia.edu
Organization name Columbia University
Department Center for Radiological Research
Street address 630 W. 168th St
City New York
State/province NY
ZIP/Postal code 10032
Country USA
 
Platforms (1)
GPL6480 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Probe Name version)
Samples (27)
GSM424524 4h0R_1
GSM424525 4h0R_2
GSM424526 4h0R_3
Relations
BioProject PRJNA117647

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE16935_RAW.tar 178.2 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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