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Series GSE168091 Query DataSets for GSE168091
Status Public on Mar 03, 2021
Title Effects of maternal gestational diet, with or without methionine, on muscle transcriptome of Bos indicus-influenced beef calves following a vaccine-induced immunological challenge
Organism Bos taurus
Experiment type Expression profiling by high throughput sequencing
Summary Maternal nutrition during gestation can cause epigenetic effects that translate to alterations in gene expression in offspring. This 2-year study employed RNA-sequencing technology to evaluate the pre- and post-vaccination muscle transcriptome of early-weaned Bos indicus-influenced beef calves born from dams offered different supplementation strategies from 57 ± 5 d prepartum until 17 ± 5 d postpartum.
 
Overall design Seventy-two Brangus heifers (36 heifers/yr) were stratified by body weight and body condition score and assigned to bahiagrass pastures (3 heifers/pasture/yr). Treatments were randomly assigned to pastures and consisted of (i) no pre- or postpartum supplementation (NOSUP), (ii) pre- and postpartum supplementation of protein and energy using 7.2 kg of dry matter/heifer/d of molasses + urea (MOL), and (iii) MOL fortified with 105 g/heifer/wk of methionine hydroxy analog (MOLMET). Calves were weaned on d 147 of the study. On d 154, 24 calves/yr (8 calves/treatment) were randomly selected and individually limit-fed a high-concentrate diet until d 201. Muscle biopsies were collected from the same calves on d 154 and 201 (4 calves/treatment/d/yr) for gene expression analysis using RNA sequencing.
 
Contributor(s) Moriel P, Peñagaricano F
Citation(s) 34166453
Submission date Mar 02, 2021
Last update date Jul 27, 2021
Contact name Francisco Peñagaricano
E-mail(s) fpenagarican@wisc.edu
Organization name University of Wisconsin-Madison
Department Animal and Dairy Sciences
Street address 1675 Observatory Drive
City Madison
State/province Wisconsin
ZIP/Postal code 53706
Country USA
 
Platforms (1)
GPL26012 Illumina NovaSeq 6000 (Bos taurus)
Samples (44)
GSM5128830 A1
GSM5128831 A2
GSM5128832 A3
Relations
BioProject PRJNA706009
SRA SRP308898

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE168091_RAW.tar 4.6 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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