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Series GSE167437 Query DataSets for GSE167437
Status Public on Mar 23, 2021
Title Isolation and long-term expansion of murine epidermal stem-like cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Epidermis is the most outer layer of the skin and serves as a physical barrier protecting the internal tissues from mechanical and environmental insults. Its constant renewing and regeneration capacity are sustained by the basal keratinocytes, which, through proliferation and differentiation, supply diverse cell types for homeostasis maintenance and injury repair. A major challenge in epidermal research is the difficulty to culture murine keratinocytes. Here we tested murine keratinocyte culture conditions and developed cell lines using low-Ca2+ (0.06 mM) keratinocyte serum-free medium (KSFM-Ca2+) without feeder cells. Cells derived in this condition could be subcultured for >70 passages. These cells displayed basal epithelial cell morphology and expressed keratin (KRT) 14, but lacked the epithelial-characteristic intercellular junctions. After adaptation to the Defined-KSFM (DKSFM) media containing 0.15 mM Ca2+, these cells formed tight- and adherens-junctions and exhibited increased Krt1/10 expression while retaining subculture capacity. Global gene expression studies showed that cells derived in KSFM-Ca2+ media had enriched expression of stem/proliferation markers and that cells adapted in DKSFM media had gene expression signatures of epithelial progenitors. Correspondingly, the KSFM-Ca2+-derived cells had a remarkable capacity of clonal growth, whereas DKSFM-adapted cells could differentiate to suprabasal subtypes in 3D cultures. The generation of stem-like murine keratinocyte lines and the conversion of these cells to epithelial progenitors capable of terminal differentiation provide useful in vitro tools for skin research.
 
Overall design Gene exepression prolfiles of two newly established murine keratinocyte lines
 
Contributor(s) Xia Y, Wang J, Zhang X
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Submission date Feb 24, 2021
Last update date Mar 25, 2021
Contact name Ying Xia
E-mail(s) xiay@ucmail.uc.edu
Organization name Univerisity of Cincinanti
Department Department of Environmental and Public Health Sciences
Street address 160 Panzeca Way
City Cincinanti
State/province Ohio
ZIP/Postal code 45267
Country USA
 
Platforms (1)
GPL21626 NextSeq 550 (Mus musculus)
Samples (6)
GSM5105144 keratinocytes in KSFM-Ca2+ rep1
GSM5105145 keratinocytes in KSFM-Ca2+ rep2
GSM5105146 keratinocytes in KSFM-Ca2+ rep3
Relations
BioProject PRJNA704653
SRA SRP307961

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Supplementary file Size Download File type/resource
GSE167437_RAW.tar 790.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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