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GEO accession:
Series GSE136445
Query DataSets for GSE136445
Status
Public on Sep 17, 2019
Title
A comparison of evolutionary changes and constraints on gene regulation between fin and limb development
Organisms
Mus musculus
;
Chiloscyllium punctatum
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
33560225
Submission date
Aug 27, 2019
Last update date
Mar 16, 2021
Contact name
Koh Onimaru
E-mail(s)
koh.onimaru@gmail.com, koh.onimaru@riken.jp
Phone
484679398
Organization name
Center for Biosystems Dynamics Research
Lab
Laboratory for Bioinformatics Research
Street address
312 Information Science Building, 2-1 Hirosawa
City
Wako
State/province
Saitama
ZIP/Postal code
351-0198
Country
Japan
Platforms (3)
GPL18480
Illumina HiSeq 1500 (Mus musculus)
GPL21273
HiSeq X Ten (Mus musculus)
GPL27153
Illumina HiSeq 1500 (Chiloscyllium punctatum)
Samples (43)
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More...
GSM4048688
ATAC-seq E09.5 replicate 1
GSM4048689
ATAC-seq E09.5 replicate 2
GSM4048690
ATAC-seq E09.5 replicate 3
GSM4048691
ATAC-seq E10.5 replicate 1
GSM4048692
ATAC-seq E10.5 replicate 2
GSM4048693
ATAC-seq E10.5 replicate 3
GSM4048694
ATAC-seq E11.5 replicate 1
GSM4048695
ATAC-seq E11.5 replicate 2
GSM4048696
ATAC-seq E11.5 replicate 3
GSM4048697
ATAC-seq E12.5 replicate 1
GSM4048698
ATAC-seq E12.5 replicate 2
GSM4048699
ATAC-seq E12.5 replicate 3
GSM4048700
ATAC-seq input
GSM4049923
RNA-seq E09.5 replicate 1
GSM4049924
RNA-seq E09.5 replicate 2
GSM4049925
RNA-seq E09.5 replicate 3
GSM4049926
RNA-seq E10.5 replicate 1
GSM4049927
RNA-seq E10.5 replicate 2
GSM4049928
RNA-seq E10.5 replicate 3
GSM4049929
RNA-seq E11.5 replicate 1
GSM4049930
RNA-seq E11.5 replicate 2
GSM4049931
RNA-seq E11.5 replicate 3
GSM4049932
RNA-seq E12.5 replicate 1
GSM4049933
RNA-seq E12.5 replicate 2
GSM4049934
RNA-seq E12.5 replicate 3
GSM4049935
RNA-seq st. 27 replicate 1
GSM4049936
RNA-seq st. 27 replicate 2
GSM4049937
RNA-seq st. 27 replicate 3
GSM4049938
RNA-seq st. 27.5 replicate 1
GSM4049939
RNA-seq st. 27.5 replicate 2
GSM4049940
RNA-seq st. 27.5 replicate 3
GSM4049941
RNA-seq st. 29 replicate 1
GSM4049942
RNA-seq st. 29 replicate 2
GSM4049943
RNA-seq st. 29 replicate 3
GSM4049944
RNA-seq st. 30 replicate 1
GSM4049945
RNA-seq st. 30 replicate 2
GSM4049946
RNA-seq st. 30 replicate 3
GSM4049947
RNA-seq st. 31 replicate 1
GSM4049948
RNA-seq st. 31 replicate 2
GSM4049949
RNA-seq st. 31 replicate 3
GSM4049950
RNA-seq st. 32 replicate 1
GSM4049951
RNA-seq st. 32 replicate 2
GSM4049952
RNA-seq st. 32 replicate 3
This SuperSeries is composed of the following SubSeries:
GSE136415
A comparison of evolutionary changes and constraints on gene regulation between fin and limb development [ATAC-seq]
GSE136437
A comparison of evolutionary changes and constraints on gene regulation between fin and limb development [RNA-seq]
Relations
BioProject
PRJNA562542
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE136445_RAW.tar
1.5 Gb
(http)
(custom)
TAR (of BW)
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