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Series GSE112111 Query DataSets for GSE112111
Status Public on Mar 21, 2018
Title CytoScan HD array data for a patient with Vitamin D deficiency
Organism Homo sapiens
Experiment type Genome variation profiling by genome tiling array
Genome variation profiling by SNP array
Summary Chromosome microarray (CMA) was performed to identify a possible CNV or ROH that could be contributing to this patient's clinical phenotype.
 
Overall design CytoScan HD arrays were performed according to the manufacturer's directions on DNA extracted from a blood sample. Copy number and ROH analysis was performed using the ChAS software.
 
Contributor(s) Brown L, Marcadier J
Citation(s) 30893535
Submission date Mar 20, 2018
Last update date Mar 02, 2021
Contact name Lindsay Brown
E-mail(s) lbrown5@cw.bc.ca
Organization name BC Children's and Woman's Health Centre of BC
Street address 4480 Oak St
City Vancouver
ZIP/Postal code V6H 3N1​
Country Canada
 
Platforms (1)
GPL16131 [CytoScanHD_Array] Affymetrix CytoScan HD Array
Samples (1)
GSM3057965 Patient 1
Relations
BioProject PRJNA439315

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE112111_RAW.tar 108.7 Mb (http)(custom) TAR (of CEL, CYCHP)
Processed data included within Sample table
Processed data provided as supplementary file

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