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Series GSE111755 Query DataSets for GSE111755
Status Public on Dec 07, 2018
Title RNA-seq data from nsd2 wt and ko germinal center B cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The goal of this study was to invetigate the mechanisms by which nsd2 regulate germinal center reaction by comparing RNA-seq data between nsd2 wt and ko germinal center B cells
 
Overall design 2×10e6 nsd2 wt and ko germinal center B cells were sorted from SRBC immunized mice and extracted in 1mL trizol. Library were then generated with illumina protocol and subject to NGS and bioinformatic analysis.
 
Contributor(s) Chen J, Wang X
Citation(s) 30566865
Submission date Mar 13, 2018
Last update date Mar 08, 2019
Contact name jingjing chen
E-mail(s) chenjingjing@njmu.edu.cn
Organization name Nanjing Medical University
Street address 101 Longmian Road
City Nanjing
ZIP/Postal code 211166
Country China
 
Platforms (1)
GPL21273 HiSeq X Ten (Mus musculus)
Samples (4)
GSM3039383 RNA-seq wt1
GSM3039384 RNA-seq wt2
GSM3039385 RNA-seq ko1
Relations
BioProject PRJNA438071
SRA SRP135255

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE111755_RAW.tar 1.6 Mb (http)(custom) TAR (of XLS)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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