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| Status |
Public on Sep 23, 2018 |
| Title |
Transcriptomic analysis of TDRD9-depleted lung tumor cells |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
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| Summary |
Tudor domain containing protein 9 (TDRD9) is a RNA helicase normally expressed in the germline. We have shown that TDRD9 is highly expressed in a subset of non-small cell lung carcinomas. Here we determine the transcriptomic changes of a TDRD9-positive lung tumor cells line (NCI-H1993) depleted of TDRD9.
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| Overall design |
NCI-H1993 cells were treated either with siRNA control, siTDRD9-1 or siTDRD9-2 during 72 h. siTDRD9-1 and siTDRD9-2 are two different siRNAs against the transcript of TDRD9 gene. Triplicated independent cultures were recovered and processed for RNA extraction and hybridization on Affymetrix microarrays.
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| Contributor(s) |
Reyes JC, Guijo M |
| Citation(s) |
29515758 |
| Submission date |
Sep 22, 2017 |
| Last update date |
Jul 25, 2021 |
| Contact name |
Jose C. Reyes |
| E-mail(s) |
jose.reyes@cabimer.es
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| Phone |
34-954467842
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| Organization name |
CABIMER
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| Department |
Molecular biology
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| Lab |
2
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| Street address |
Av. Américo Vespucio
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| City |
Sevilla |
| ZIP/Postal code |
41092 |
| Country |
Spain |
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| Platforms (1) |
| GPL15207 |
[PrimeView] Affymetrix Human Gene Expression Array |
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| Samples (9)
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| Relations |
| BioProject |
PRJNA411824 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE104151_RAW.tar |
17.2 Mb |
(http)(custom) |
TAR (of CEL) |
| Processed data included within Sample table |
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