NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Platform GPL9829 Query DataSets for GPL9829
Status Public on Jun 30, 2010
Title NimbleGen/RIKEN Aspergillus fumigatus 4x72K array
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Aspergillus fumigatus Af293
Manufacturer NimbleGen
Manufacture protocol High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/.
 
Description Species: Aspergillus fumigatus
Strain: Af293
Type of array: Eukaryotic Expression(4plex)
Number of targets: 9,887
Length of probes: 60-mer
Number of probes per target: 7 pairs
Replicate: 1

Oligonucleotide sequences are available in the '2009-01-07_RDKK143_Afum_60mer_expr.ndf' supplementary file.
 
Contributor(s) Motoyama T, Osada H
Submission date Dec 28, 2009
Last update date Jun 30, 2010
Contact name Takayuki Motoyama
Organization name RIKEN
Street address 2-1 Hirosawa
City Wako
State/province Saitama
ZIP/Postal code 351-0198
Country Japan
 
Samples (4) GSM491378, GSM491379, GSM491380, GSM491381
Series (1)
GSE19682 Expression analysis of trichostatin A-treated Aspergillus fumigatus Af293

Data table header descriptions
ID SEQ_ID
ORF Locus tag
NAME Gene name

Data table
ID ORF NAME
Afu1g00110 AFUA_1G00110 hypothetical protein
Afu1g00120 AFUA_1G00120 hypothetical protein
Afu1g00130 AFUA_1G00130 hypothetical protein
Afu1g00140 AFUA_1G00140 transposase
Afu1g00150 AFUA_1G00150 RING finger protein
Afu1g00160 AFUA_1G00160 hypothetical protein
Afu1g00170 AFUA_1G00170 hypothetical protein
Afu1g00180 AFUA_1G00180 hypothetical protein
Afu1g00190 AFUA_1G00190 hypothetical protein
Afu1g00200 AFUA_1G00200 F-box domain and ankyrin repeat protein
Afu1g00210 AFUA_1G00210 hypothetical protein
Afu1g00220 AFUA_1G00220 hypothetical protein
Afu1g00230 AFUA_1G00230 hypothetical protein
Afu1g00240 AFUA_1G00240 hypothetical protein
Afu1g00250 AFUA_1G00250 cell wall surface anchor family protein, putative
Afu1g00260 AFUA_1G00260 hypothetical protein
Afu1g00270 AFUA_1G00270 hypothetical protein
Afu1g00280 AFUA_1G00280 hypothetical protein
Afu1g00290 AFUA_1G00290 ankyrin repeat domain protein, putative
Afu1g00300 AFUA_1G00300 ankyrin repeat protein

Total number of rows: 9887

Table truncated, full table size 530 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL9829_2009-01-07_RDKK143_Afum_60mer_expr.ndf.gz 4.1 Mb (ftp)(http) NDF
GPL9829_2009-01-07_RDKK143_Afum_60mer_expr.ngd.gz 214.5 Kb (ftp)(http) NGD

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap