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Platform GPL8059 Query DataSets for GPL8059
Status Public on Jun 01, 2009
Title Mouse Genome 430 2.0 Array [Mm430_Mm_REFSEQ (v10) CDF]
Technology type spotted oligonucleotide
Distribution custom-commercial
Organism Mus musculus
Manufacturer Affymetrix
Manufacture protocol This is identical to GPL1261 but a custom cdf environment was used to extract data. Custom chip definition files (CDF) based on REFSEQ v10 (Brainarray) rather than Affymetrix annotation (Dai et al., PMID: 16284200).
 
 
Web link http://brainarray.mbni.med.umich.edu/Brainarray/Database/CustomCDF/CDF_download.asp
Submission date Jan 12, 2009
Last update date Jun 01, 2009
Contact name Francois Verrey
E-mail(s) verrey@access.uzh.ch
Phone +41 44 635 50 44
Fax +41 44 635 68 14
Organization name University of Zurich
Department Institute of Physiology
Street address Winterthurerstr. 190
City Zurich
ZIP/Postal code CH-8057
Country Switzerland
 
Samples (12) GSM359429, GSM359430, GSM359431, GSM359432, GSM359433, GSM359434 
Series (1)
GSE14375 Culture induced changes in Blood-Brain Barrier transcriptome: implications for amino acid transporters in vivo
Relations
Alternative to GPL1261 (Alternative CDF [official])

Data table header descriptions
ID
GB_ACC GenBank Accession
ProbeHitCnt
Strand
Length
SPOT_ID

Data table
ID GB_ACC ProbeHitCnt Strand Length SPOT_ID
NM_001001144_at CF982253 11 + 556
NM_001001152_at AV276001 11 + 672
NM_001001160_at AK147681 22 + 6359
NM_001001176_at BI738906 11 + 780
NM_001001177_at AV278321 11 + 673
NM_001001179_at BG870083 8 + 413
NM_001001180_at BC068250 21 + 2574
NM_001001181_at CX732524 6 + 567
NM_001001182_at NM_001001182 33 + 7980
NM_001001183_at BF780408 25 + 635
NM_001001184_at AI152150 11 + 431
NM_001001185_at CJ047310 12 + 598
NM_001001295_at NM_172519 11 + 3224
NM_001001297_at AK033465 22 + 1663
NM_001001309_at BC037488 22 + 2964
NM_001001321_at AK017526 11 + 1000
NM_001001326_at AW557299 11 - 599
NM_001001333_at AA124250 11 + 591
NM_001001334_at BB050326 4 + 214
NM_001001335_at AI322512 5 + 458

Total number of rows: 21625

Table truncated, full table size 698 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL8059_Mm430_Mm_REFSEQ_probe_tab.txt.gz 5.1 Mb (ftp)(http) TXT

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