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Status
Public on Feb 09, 2017
Title
NimbleGen Human 2.1M array v1.0 [110201_HG19_KB_ChIP_HX1]
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Homo sapiens Manufacturer
NimbleGen
Manufacture protocol
see manufacturer's web site www.nimblegen.com
Description
Annotations are based on the Hg19 build of the human genome
Submission date
Jun 07, 2016
Last update date
Feb 09, 2017
Contact name
John G Zampella
E-mail(s)
jzampel1@jhmi.edu Organization name
Johns Hopkins University School of Medicine
Department
Dermatology
Lab
Kathleen Burns
Street address
733 N Broadway
City
Baltimore
State/province
MD
ZIP/Postal code
21287
Country
USA
Samples (60)
GSM2218519 , GSM2218520 , GSM2218521 , GSM2218522 , GSM2218523 , GSM2218524
GSM2218525 ,
GSM2218526 ,
GSM2218527 ,
GSM2218528 ,
GSM2218529 ,
GSM2218530 ,
GSM2218531 ,
GSM2218532 ,
GSM2218533 ,
GSM2218534 ,
GSM2218535 ,
GSM2218536 ,
GSM2218537 ,
GSM2218538 ,
GSM2218539 ,
GSM2218540 ,
GSM2218541 ,
GSM2218542 ,
GSM2218543 ,
GSM2218544 ,
GSM2218545 ,
GSM2218546 ,
GSM2218547 ,
GSM2218548 ,
GSM2218549 ,
GSM2218550 ,
GSM2218551 ,
GSM2218552 ,
GSM2218553 ,
GSM2218554 ,
GSM2218555 ,
GSM2218556 ,
GSM2218557 ,
GSM2218558 ,
GSM2218559 ,
GSM2218560 ,
GSM2218561 ,
GSM2218562 ,
GSM2218563 ,
GSM2218564 ,
GSM2218565 ,
GSM2218566 ,
GSM2218567 ,
GSM2218568 ,
GSM2218569 ,
GSM2218570 ,
GSM2218571 ,
GSM2218572 ,
GSM2218573 ,
GSM2218574 ,
GSM2218575 ,
GSM2218576 ,
GSM2218577 ,
GSM2218578 Series (1)
GSE83756 A map of mobile DNA insertions in the NCI-60 human cancer cell panel
Data table header descriptions ID PROBE_ID from .pos file
SEQ_ID CHROMOSOME RANGE_GB CHROMOSOME accession number.version
RANGE_START POSITION. Probe start position (relative to the RANGE_GB)
PROBE_COUNT LENGTH GC SEQUENCE probe sequence
Data table ID SEQ_ID CHROMOSOME RANGE_GB RANGE_START PROBE_COUNT LENGTH GC SEQUENCE CHR01FS000924412
chr1:924341-1001492
chr1
NC_000001.10 924412
1
52
0.42
TCTGGAGTTCGTGGTTGATTGTTTCTAGAGTTTGGGGTTGATTGTTTCTGGA
CHR01FS000924608
chr1:924341-1001492
chr1
NC_000001.10 924608
1
52
0.42
GGTTGATTTTTTCTGGAGTTCAGGGTTGATTGTTTCTGGAATTCGGGGTTGA
CHR01FS000924840
chr1:924341-1001492
chr1
NC_000001.10 924840
1
57
0.30
TTTTGATGATGTCTAATTTTTTTCTTTGGTCACTTATGCTTCTGGTATCTGTTTTAG
CHR01FS000925020
chr1:924341-1001492
chr1
NC_000001.10 925020
1
50
0.52
TTCCTTCTGTGTCATCCCTGGACAAAGAAGACAGAGTGGGAGAGCAGGAG
CHR01FS000925236
chr1:924341-1001492
chr1
NC_000001.10 925236
1
50
0.44
ACCACAGCAGTATCCTACCTAAGAAGACTTTTGCCCAAGGTCTTTCCAAA
CHR01FS000925484
chr1:924341-1001492
chr1
NC_000001.10 925484
1
50
0.64
TCCTGCCTCACCCTTCTGAGTAGCGGGGATTCCAGCCGCCTGCCACCATG
CHR01FS000925941
chr1:924341-1001492
chr1
NC_000001.10 925941
1
57
0.40
TCATTCATTTTGAGTTCTCTGTGTGTGTGATGTGAATAATGTGAGCAGCTTCCCTCA
CHR01FS000926361
chr1:924341-1001492
chr1
NC_000001.10 926361
1
57
0.26
TCTCAAAAAAACAAGTTTCATTTTTATATTGTTCATTGCCAGTGTGAACAAATACAA
CHR01FS000926639
chr1:924341-1001492
chr1
NC_000001.10 926639
1
50
0.66
CTGCCTCCTGGGCCTAAGCAGTCGCCCCACCTCAGCCTGCAGAGTAGCTG
CHR01FS000927215
chr1:924341-1001492
chr1
NC_000001.10 927215
1
55
0.40
TCATTTTCTTTCCTAATTGCTCTGGCAGGAACTTCCTGGAGTGTCAAAAGTAAGA
CHR01FS000927391
chr1:924341-1001492
chr1
NC_000001.10 927391
1
55
0.35
ATCAAGCTTGGAAAAACTCCAATCATTATTTCTTCAGCTATTTTACCTTCTTCCC
CHR01FS000927866
chr1:924341-1001492
chr1
NC_000001.10 927866
1
52
0.23
TCTGTTTTATTTTAAATAGTTTTTATTGTTATAGTTTCGAGTTGACTACTGT
CHR01FS000928166
chr1:924341-1001492
chr1
NC_000001.10 928166
1
50
0.44
CACACCTGGAATAGCTTCTTGGAGTAAGTTGTAGCAGCAGCTTTCATATC
CHR01FS000928366
chr1:924341-1001492
chr1
NC_000001.10 928366
1
50
0.62
TCATCTGAGGAGGGTCCATGTGTCCGTCATCTGGCAGGGTCCCCGTGTCC
CHR01FS000928560
chr1:924341-1001492
chr1
NC_000001.10 928560
1
50
0.48
GGACACTCTCACTGTAACGTCAGCTCAGATCCTTCATGCTTTCATTGCTG
CHR01FS000928742
chr1:924341-1001492
chr1
NC_000001.10 928742
1
50
0.56
GTTCATTGGCCACCTCCTGGAGTGCTGCTCTCACCCCTTTCCCAACAAAC
CHR01FS000928944
chr1:924341-1001492
chr1
NC_000001.10 928944
1
50
0.68
AGAGCCAGCAGACCTCATCCCTGACCGGGGCTGGGGGGGCCAAGACCAAG
CHR01FS000929184
chr1:924341-1001492
chr1
NC_000001.10 929184
1
50
0.48
TGGTGGAAGGTATAGACCATGGGGGTGGGTTTCTCATGAATGGCTTAGTA
CHR01FS000929368
chr1:924341-1001492
chr1
NC_000001.10 929368
1
50
0.54
TTCTCCTTCTGCCAGGATTGGAAGTTTCCTGGGGCCTCCCCAAAAGCTGA
CHR01FS000929710
chr1:924341-1001492
chr1
NC_000001.10 929710
1
50
0.54
AAAAAGCTGAGCAGGTGCCAGCACCATGCTACCTGTGTAGCCTGCAGAAG
2168456 282992 Kbytes .Supplementary file Size Download File type/resource GPL21986_110201_HG19_KB_ChIP_HX1.ndf.gz
144.7 Mb
(ftp) (http) NDF
GPL21986_110201_HG19_KB_ChIP_HX1.pos.gz
17.8 Mb
(ftp) (http) POS
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