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Platform GPL21170 Query DataSets for GPL21170
Status Public on Dec 01, 2015
Title [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [AltAnalyze 2.0.7 Galaxy1-_HuEx-1_0-st-v2.probe.tab]
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer Affymetrix
Manufacture protocol see manufacturer's web site
 
Description AltAnalyze version 2.0.7 Galaxy1-_HuEx-1_0-st-v2.probe.tab_.tabular
 
Submission date Nov 24, 2015
Last update date Dec 01, 2015
Contact name James Uney
E-mail(s) james.uney@bristol.ac.uk
Phone 01173311466
Organization name University of Bristol
Department School of Clinical Sciences
Street address Medical School, University Walk
City Bristol
ZIP/Postal code BS8 1TD
Country United Kingdom
 
Samples (6) GSM1955561, GSM1955562, GSM1955563, GSM1955564, GSM1955565, GSM1955566
Series (2)
GSE75465 Human Exon 1.0 ST Affymetrix array data from SHSY-5Y cells
GSE75469 Affymetrix exon array and iCLIP analysis of SAFB1 function

Data table header descriptions
ID
Probe Set ID
probe x
probe y
assembly
seqname
start
stop
strand
SEQUENCE
target strandedness
category

Data table
ID Probe Set ID probe x probe y assembly seqname start stop strand SEQUENCE target strandedness category
494998 2315101 917 193 build-34/hg16 chr1 1788 1812 + CACGGGAAGTCTGGGCTAAGAGACA Sense main
1734213 2315101 1092 677 build-34/hg16 chr1 1973 1997 + ACAGGGGCCAGAAGATGAACAATGG Sense main
4767517 2315101 796 1862 build-34/hg16 chr1 1992 2016 + ATTAAGTTACATGCAGACAACAGGG Sense main
4286427 2315101 986 1674 build-34/hg16 chr1 2006 2030 + TGCCTGGTTGTGGTATTAAGTTACA Sense main
5760145 2315102 144 2250 build-34/hg16 chr1 2520 2544 + TCGGCCGTCGTCTTCTGCAGCTCTG Sense main
671410 2315102 689 262 build-34/hg16 chr1 2523 2547 + AAGTCGGCCGTCGTCTTCTGCAGCT Sense main
4275780 2315102 579 1670 build-34/hg16 chr1 2526 2550 + TCCAAGTCGGCCGTCGTCTTCTGCA Sense main
4293462 2315102 341 1677 build-34/hg16 chr1 2531 2555 + TGTGATCCAAGTCGGCCGTCGTCTT Sense main
5388 2315103 267 2 build-34/hg16 chr1 2927 2951 + CTGTCTGTCGACCCAGCTGGAGGCA Sense main
6528805 2315103 804 2550 build-34/hg16 chr1 2929 2953 + CCCTGTCTGTCGACCCAGCTGGAGG Sense main
5660748 2315103 587 2211 build-34/hg16 chr1 2931 2955 + GCCCCTGTCTGTCGACCCAGCTGGA Sense main
4214884 2315103 1123 1646 build-34/hg16 chr1 2934 2958 + CCAGCCCCTGTCTGTCGACCCAGCT Sense main
2808561 2315104 240 1097 build-34/hg16 chr1 3229 3253 + AAAGGCAGGAGTGAACTTCCACACA Sense main
4928136 2315104 135 1925 build-34/hg16 chr1 3549 3573 + CCCTGGGAAGATCTCACGGATGGCC Sense main
3745878 2315104 597 1463 build-34/hg16 chr1 3704 3728 + TTATTATAGAAAGGGCAGTAGCAGA Sense main
4616726 2315104 1045 1803 build-34/hg16 chr1 3727 3751 + TAGTCCAGGGCAGCTAACTTTAGTT Sense main
6139850 2315105 969 2398 build-34/hg16 chr1 4013 4037 + CTCTAAAAATAGTCATGCTGAGAGC Sense main
5606868 2315105 467 2190 build-34/hg16 chr1 4017 4041 + GGGTCTCTAAAAATAGTCATGCTGA Sense main
1531700 2315105 819 598 build-34/hg16 chr1 4197 4221 + AAACGTCTCGGGGTCAGTGACTGCC Sense main
4700654 2315105 493 1836 build-34/hg16 chr1 4207 4231 + TGCAGGATGCAAACGTCTCGGGGTC Sense main

Total number of rows: 5431924

Table truncated, full table size 540467 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL21170_HuEx-1_0-st-v2.r2.pgf.gz 95.4 Mb (ftp)(http) PGF
GPL21170_Probe_ID-to-ENSG.txt.gz 1.0 Mb (ftp)(http) TXT

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