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Platform GPL15424 Query DataSets for GPL15424
Status Public on Jun 19, 2013
Title [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [HuGene10stv1_Hs_ENST]
Technology type in situ oligonucleotide
Distribution commercial
Organism Homo sapiens
Manufacturer Affymetrix
Manufacture protocol See manufacturer's web site
 
Description custom CDF: HuGene10stv1_Hs_ENST.cdf (version 13, defining probe sets for transcripts from Ensembl core database version 58)
 
Submission date Apr 11, 2012
Last update date Jun 21, 2013
Contact name Johannes Rainer
E-mail(s) johannes.rainer@eurac.edu
Organization name Eurac Researc
Department Institute for Biomedicine
Lab Biomedical Informatics
Street address Via A. Volta 21
City Bolzano
ZIP/Postal code 39100
Country Italy
 
Samples (6) GSM912876, GSM912877, GSM912878, GSM912879, GSM912880, GSM912881
Series (1)
GSE37172 EpCAM overexpression prolongs proliferative capacity of primary human breast epithelial cells and supports hyperplastic growth
Relations
Alternative to GPL6244 (alternative CDF [official])

Data table header descriptions
ID
ORF Entrez gene ID
gene_id Ensembl gene identifier
gene_name
chromosome chromosome_name
Gene_symbol
SPOT_ID Ensembl transcript identifier
coord_system
probe_count
gene_biotype
transcript_biotype

Data table
ID ORF gene_id gene_name chromosome Gene_symbol SPOT_ID coord_system probe_count gene_biotype transcript_biotype
ENST00000000233_at 381 ENSG00000004059 ARF5 7 ARF5 ENST00000000233 chromosome 30 protein_coding protein_coding
ENST00000000412_at 4074 ENSG00000003056 M6PR 12 M6PR ENST00000000412 chromosome 18 protein_coding protein_coding
ENST00000000442_at 2101 ENSG00000173153 ESRRA 11 ESRRA ENST00000000442 chromosome 13 protein_coding protein_coding
ENST00000001008_at 2288 ENSG00000004478 FKBP4 12 FKBP4 ENST00000001008 chromosome 21 protein_coding protein_coding
ENST00000001146_at 56603 ENSG00000003137 CYP26B1 2 CYP26B1 ENST00000001146 chromosome 27 protein_coding protein_coding
ENST00000002125_at 55471 ENSG00000003509 C2orf56 2 C2orf56 ENST00000002125 chromosome 40 protein_coding protein_coding
ENST00000002165_at 2519 ENSG00000001036 FUCA2 6 FUCA2 ENST00000002165 chromosome 23 protein_coding protein_coding
ENST00000002501_at 79007 ENSG00000003249 DBNDD1 16 DBNDD1 ENST00000002501 chromosome 26 protein_coding protein_coding
ENST00000002596_at 9957 ENSG00000002587 HS3ST1 4 HS3ST1 ENST00000002596 chromosome 27 protein_coding protein_coding
ENST00000002829_at 6405 ENSG00000001617 SEMA3F 3 SEMA3F ENST00000002829 chromosome 44 protein_coding protein_coding
ENST00000003084_at 1080 ENSG00000001626 CFTR 7 CFTR ENST00000003084 chromosome 42 protein_coding protein_coding
ENST00000003100_at 1595 ENSG00000001630 CYP51A1 7 CYP51A1 ENST00000003100 chromosome 6 protein_coding protein_coding
ENST00000003302_at 57646 ENSG00000048028 USP28 11 USP28 ENST00000003302 chromosome 31 protein_coding protein_coding
ENST00000003583_at 90529 ENSG00000001460 C1orf201 1 C1orf201 ENST00000003583 chromosome 22 protein_coding protein_coding
ENST00000003607_at ENSG00000004142 POLDIP2 17 ENST00000003607 chromosome 30 processed_transcript processed_transcript
ENST00000003834_at 23098 ENSG00000004139 SARM1 17 SARM1 ENST00000003834 chromosome 33 protein_coding protein_coding
ENST00000003912_at 57185 ENSG00000001461 NIPAL3 1 NIPAL3 ENST00000003912 chromosome 20 protein_coding protein_coding
ENST00000004103_at 55365 ENSG00000002933 TMEM176A 7 TMEM176A ENST00000004103 chromosome 28 protein_coding protein_coding
ENST00000004531_at 6542 ENSG00000003989 SLC7A2 8 SLC7A2 ENST00000004531 chromosome 30 protein_coding protein_coding
ENST00000004921_at 6362 ENSG00000006074 CCL18 17 CCL18 ENST00000004921 chromosome 25 protein_coding protein_coding

Total number of rows: 105342

Table truncated, full table size 12150 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL15424_HuGene10stv1_Hs_ENST.cdf.gz 31.6 Mb (ftp)(http) CDF
GPL15424_HuGene10stv1_Hs_ENST.cdf.txt.gz 12.2 Mb (ftp)(http) TXT
GPL15424_HuGene10stv1_Hs_ENST_annotation.txt.gz 2.4 Mb (ftp)(http) TXT

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