GEO help: Mouse over screen elements for information.
Status
Public on Jul 28, 2010
Title
[MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [probe set (exon) version]
Technology type
in situ oligonucleotide
Distribution
commercial
Organism
Mus musculus Manufacturer
Affymetrix
Manufacture protocol
See manufacturer's web site
Description
Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html
Submission date
Jul 28, 2010
Last update date
Jul 29, 2010
Organization
Affymetrix, Inc.
E-mail(s)
geo@ncbi.nlm.nih.gov, support@affymetrix.com Phone
888-362-2447
URL
http://www.affymetrix.com/index.affx Street address
City
Santa Clara
State/province
CA
ZIP/Postal code
95051
Country
USA
Samples (405)
GSM578134 , GSM578135 , GSM578136 , GSM578137 , GSM578138 , GSM578139
GSM578140 ,
GSM578141 ,
GSM628053 ,
GSM628054 ,
GSM628055 ,
GSM628056 ,
GSM628057 ,
GSM628058 ,
GSM628059 ,
GSM628060 ,
GSM628061 ,
GSM628062 ,
GSM628063 ,
GSM628064 ,
GSM649508 ,
GSM649509 ,
GSM649510 ,
GSM649511 ,
GSM649512 ,
GSM649513 ,
GSM657951 ,
GSM657952 ,
GSM657953 ,
GSM657954 ,
GSM657955 ,
GSM657956 ,
GSM657957 ,
GSM657958 ,
GSM657959 ,
GSM657960 ,
GSM754741 ,
GSM754742 ,
GSM754743 ,
GSM754744 ,
GSM754745 ,
GSM754746 ,
GSM754747 ,
GSM754748 ,
GSM754749 ,
GSM754750 ,
GSM763331 ,
GSM763332 ,
GSM763333 ,
GSM763334 ,
GSM763335 ,
GSM763336 ,
GSM794680 ,
GSM794681 ,
GSM794682 ,
GSM794683 ,
GSM794684 ,
GSM794685 ,
GSM794686 ,
GSM794687 ,
GSM813922 ,
GSM813923 ,
GSM813924 ,
GSM813925 ,
GSM813926 ,
GSM813927 ,
GSM813928 ,
GSM813929 ,
GSM814730 ,
GSM814731 ,
GSM814732 ,
GSM814733 ,
GSM814734 ,
GSM814735 ,
GSM814736 ,
GSM814737 ,
GSM814738 ,
GSM814739 ,
GSM814740 ,
GSM814741 ,
GSM814742 ,
GSM814743 ,
GSM814744 ,
GSM814745 ,
GSM814746 ,
GSM814747 ,
GSM814748 ,
GSM814749 ,
GSM822325 ,
GSM822326 ,
GSM848767 ,
GSM848768 ,
GSM848769 ,
GSM848770 ,
GSM848771 ,
GSM848772 ,
GSM848773 ,
GSM848774 ,
GSM848775 ,
GSM848776 ,
GSM942185 ,
GSM942186 ,
GSM942187 ,
GSM942188 ,
GSM942189 ,
GSM942190 ,
GSM942191 ,
GSM942192 ,
GSM942193 ,
GSM942194 ,
GSM942195 ,
GSM942196 ,
GSM942197 ,
GSM942198 ,
GSM942199 ,
GSM942200 ,
GSM942201 ,
GSM942202 ,
GSM942203 ,
GSM942204 ,
GSM942205 ,
GSM942206 ,
GSM942207 ,
GSM942208 ,
GSM942919 ,
GSM942920 ,
GSM942921 ,
GSM942922 ,
GSM942923 ,
GSM942924 ,
GSM942925 ,
GSM942926 ,
GSM942927 ,
GSM960857 ,
GSM960858 ,
GSM960859 ,
GSM960860 ,
GSM960861 ,
GSM960862 ,
GSM966567 ,
GSM966568 ,
GSM966569 ,
GSM966570 ,
GSM966571 ,
GSM966572 ,
GSM966573 ,
GSM966574 ,
GSM966575 ,
GSM966576 ,
GSM966577 ,
GSM978503 ,
GSM978504 ,
GSM978505 ,
GSM978506 ,
GSM978507 ,
GSM978508 ,
GSM978509 ,
GSM978510 ,
GSM1023629 ,
GSM1023630 ,
GSM1023631 ,
GSM1023632 ,
GSM1023633 ,
GSM1023634 ,
GSM1023635 ,
GSM1023636 ,
GSM1063684 ,
GSM1063685 ,
GSM1063686 ,
GSM1063687 ,
GSM1063688 ,
GSM1063689 ,
GSM1063690 ,
GSM1149504 ,
GSM1149505 ,
GSM1149506 ,
GSM1149507 ,
GSM1149508 ,
GSM1149509 ,
GSM1149510 ,
GSM1149511 ,
GSM1149512 ,
GSM1149513 ,
GSM1149514 ,
GSM1149515 ,
GSM1149516 ,
GSM1149517 ,
GSM1149518 ,
GSM1149519 ,
GSM1149520 ,
GSM1149521 ,
GSM1149522 ,
GSM1149523 ,
GSM1149524 ,
GSM1149525 ,
GSM1149526 ,
GSM1149527 ,
GSM1220780 ,
GSM1220781 ,
GSM1220782 ,
GSM1220783 ,
GSM1220784 ,
GSM1220785 ,
GSM1224728 ,
GSM1224729 ,
GSM1224730 ,
GSM1224733 ,
GSM1224734 ,
GSM1224735 ,
GSM1224745 ,
GSM1224746 ,
GSM1224747 ,
GSM1224748 ,
GSM1224749 ,
GSM1224750 ,
GSM1234835 ,
GSM1234836 ,
GSM1234837 ,
GSM1234838 ,
GSM1234839 ,
GSM1234840 ,
GSM1234841 ,
GSM1234842 ,
GSM1234843 ,
GSM1234844 ,
GSM1234845 ,
GSM1234846 ,
GSM1240356 ,
GSM1240357 ,
GSM1240358 ,
GSM1240359 ,
GSM1240360 ,
GSM1240361 ,
GSM1240362 ,
GSM1240363 ,
GSM1240364 ,
GSM1240365 ,
GSM1240366 ,
GSM1240367 ,
GSM1240368 ,
GSM1240369 ,
GSM1240370 ,
GSM1240371 ,
GSM1254241 ,
GSM1254242 ,
GSM1254243 ,
GSM1254244 ,
GSM1254245 ,
GSM1254246 ,
GSM1254247 ,
GSM1254248 ,
GSM1254249 ,
GSM1254250 ,
GSM1254251 ,
GSM1254252 ,
GSM1254253 ,
GSM1254254 ,
GSM1254255 ,
GSM1254256 ,
GSM1254257 ,
GSM1254258 ,
GSM1267211 ,
GSM1267212 ,
GSM1267213 ,
GSM1267214 ,
GSM1312750 ,
GSM1312751 ,
GSM1312752 ,
GSM1312753 ,
GSM1312754 ,
GSM1312755 ,
GSM1315403 ,
GSM1315404 ,
GSM1315405 ,
GSM1315406 ,
GSM1315407 ,
GSM1315408 ,
GSM1366499 ,
GSM1366500 ,
GSM1366501 ,
GSM1366502 ,
GSM1366503 ,
GSM1366504 ,
GSM1387472 ,
GSM1387473 ,
GSM1387474 ,
GSM1387475 ,
GSM1387476 ,
GSM1387477 ,
GSM1432236 ,
GSM1435743 ,
GSM1435744 ,
GSM1435745 ,
GSM1435746 ,
GSM1435747 ,
GSM1435748 ,
GSM1435749 ,
GSM1435750 ,
GSM1530106 ,
GSM1530107 ,
GSM1530108 ,
GSM1530109 ,
GSM1530110 ,
GSM1530111 ,
GSM1530112 ,
GSM1530113 ,
GSM1530114 ,
GSM1530115 ,
GSM1530116 ,
GSM1530117 ,
GSM1648752 ,
GSM1648753 ,
GSM1648754 ,
GSM1648755 ,
GSM1648756 ,
GSM1648757 ,
GSM1648758 ,
GSM1648759 ,
GSM1648760 ,
GSM1648761 ,
GSM1648762 ,
GSM1648763 ,
GSM1700396 ,
GSM1700397 ,
GSM1700398 ,
GSM1700399 ,
GSM1700400 ,
GSM1700401 ,
GSM1700402 ,
GSM1700403 ,
GSM1711879 ,
GSM1711880 ,
GSM1711881 ,
GSM1711882 ,
GSM1711883 ,
GSM1711884 ,
GSM1711885 ,
GSM1782579 ,
GSM1782580 ,
GSM1782581 ,
GSM1782582 ,
GSM1782583 ,
GSM1782584 ,
GSM1782585 ,
GSM1782586 ,
GSM1782587 ,
GSM1782588 ,
GSM1782589 ,
GSM1782590 ,
GSM1782591 ,
GSM1782592 ,
GSM1782593 ,
GSM1782594 ,
GSM1782595 ,
GSM1782596 ,
GSM2199346 ,
GSM2199347 ,
GSM2199348 ,
GSM2199349 ,
GSM2199350 ,
GSM2199351 ,
GSM2199352 ,
GSM2199353 ,
GSM2199354 ,
GSM2831692 ,
GSM2831693 ,
GSM2831694 ,
GSM2831695 ,
GSM2831696 ,
GSM2831697 ,
GSM2831698 ,
GSM2831699 ,
GSM2831700 ,
GSM2831701 ,
GSM2831702 ,
GSM2831703 ,
GSM2831704 ,
GSM2831705 ,
GSM2831706 ,
GSM2831707 ,
GSM2831708 ,
GSM2831709 ,
GSM2831710 ,
GSM2831711 ,
GSM2831712 ,
GSM2831713 ,
GSM2831714 ,
GSM2831715 ,
GSM2831716 ,
GSM2831717 ,
GSM2831718 ,
GSM3111025 ,
GSM3111026 ,
GSM3111027 ,
GSM3111028 ,
GSM3111029 ,
GSM3111030 ,
GSM3111031 ,
GSM3111032 ,
GSM3111033 ,
GSM3111034 ,
GSM3111035 ,
GSM3111036 ,
GSM4985142 ,
GSM4985143 Series (52)
GSE23568 Expression data analyzing ID3 (Inhibitor of DNA binding 3)-affected mouse T cells
GSE25551 Expression data from bone marrow derived granulocyte monocyte precursors (GMPs) from wt -, Gfi1 knock-out -, human-Gfi1-SNP36N knock in and human wt-Gfi1 knock in mice
GSE26460 Expression data from primary hepatocytes isolated from miR-143DOX mice
GSE26719 Gene expression analysis of dendritic cells from normal or tumor bearing prostates
GSE30429 Gene Array Analyzer (GAA): Alternative usage of gene arrays to study alternative splicing events (MoGene array)
GSE30762 Mouse expression analysis
GSE32051 Capicua-dependent transcriptional changes in adult mouse cerebellum
GSE32910 Growth factor independence 1 (Gfi1) as a new target for leukemia therapy
GSE33183 Gene Array Analyzer (GAA): Alternative usage of gene arrays to study alternative splicing events
GSE34416 Differential gene expression in mice infected with distinct Toxoplasma gondii strains
GSE38444 Expression data from murine liver tissue
GSE38445 Expression data from murine adipose tissue
GSE38446 Expression data from murine liver and adipose tissue
GSE38471 Enhancing Mammary Differentiation by Overcoming Lineage Specific Epigenetic Modification and Signature Gene Expression of Fibroblast Derived iPSCs
GSE39317 Identification of novel type 2 diabetes candidate genes involved in the crosstalk between the mitochondrial and the insulin signaling systems: chronic insulin treatment
GSE39320 Identification of novel type 2 diabetes candidate genes involved in the crosstalk between the mitochondrial and the insulin signaling systems
GSE39360 Comparison of Zmiz1-induced keratoancanthoma and normal skin
GSE39750 Programmed necrosis and apoptosis differentially regulate cancer development and biliary homeostasis in the liver
GSE41758 The Lin28b-let-7-Hmga2 axis determines the higher self-renewal potential of fetal haematopoietic stem cells
GSE43485 Expression profiling in miR-290 6dt1 mammary tumors
GSE43487 Mammary tumors
GSE47437 Lymph node CD4+ T cell and thioglycollate-elicited peritoneal macrophage expression data from naïve young and old SJL/J and SJL-ChrY^B10.S male mice
GSE47440 The Y chromosome as a regulatory element shaping immune cell transcriptomes and susceptibility to autoimmune disease
GSE50530 Identification of ATF2 target genes
GSE50617 Expression data from mouse CD3+ T-cells from WT and KLF13 KO mice
GSE50620 Loss of beta-catenin triggers oxidative stress and impairs hematopoietic regeneration
GSE51012 Comparative transcriptome profiling of the injured zebrafish and mouse hearts identifies miRNA-dependent repair pathways
GSE51014 Comparative transcriptome profiling of the injured zebrafish and mouse hearts identifies miRNA-dependent repair pathways
GSE51189 Transcriptional network analysis in muscle reveals AP-1 as a partner of PGC-1α in the regulation of the hypoxic gene program [microarray: PGC1a_vs_GFP]
GSE51190 Transcriptional network analysis in muscle reveals AP-1 as a partner of PGC-1α in the regulation of the hypoxic gene program [microarray: kD_AP1]
GSE51191 Transcriptional network analysis in muscle reveals AP-1 as a partner of PGC-1α in the regulation of the hypoxic gene program
GSE51866 Gene expression data for liver, adipose, and skeletal muscle tissues of MKR and Healthy mice.
GSE52458 Overexpression of splicing factor SRSF6 in mouse skin
GSE54309 A targeted knockdown screen of genes coding for phosphoinositide modulators identifies PIP4K2A as required for acute myeloid leukemia cell proliferation and survival
GSE54441 Differences among inbred mouse strains in sensitivity to TGF-ß1 induced renal fibrosis: association with TIMP-1 and EGR2 expression
GSE56662 Expression data from murine natural killer cell subsets based on Ly49 receptor expression in C57BL/6 mice (C/I+ versus Ly49G2+ NK cells)
GSE57716 Meg3 regulated genes in pancreatic beta cells
GSE59272 Fibronectin regulates Wnt7a signaling and satellite cell expansion
GSE59360 Whole gene expression data from Gfi-1-/- and Gfi-1-/-;Id2+/- mouse bone marrow cells
GSE62617 MOF regulates cell cycle progression
GSE67523 Biological characterization of gene response to insulin-induced hypoglycemia in mouse retina
GSE69378 SETDB1 Represses Endogenous and Exogenous Retroviruses in B Lymphocytes [array]
GSE69504 SETDB1 Represses Endogenous and Exogenous Retroviruses in B Lymphocytes
GSE69881 MicroRNAs of the RPE are essential for RPE differentiation and photoreceptor maturation (mRNA)
GSE69883 MicroRNAs of the RPE are essential for RPE differentiation and photoreceptor maturation
GSE70475 TREM2 regulates microglial cell activation in response to demyelination in vivo
GSE70707 MOF maintains Transcriptional Programs required to protect cells against Stress
GSE83313 Expression data from human HMGN4- and HMGN2-expressing mouse embryionic fibroblasts
GSE106215 Tracking of Individual Cell Populations by 19F MRI using a "Cargo Internalization Receptor (CIR)" System
GSE113680 Gene expression signatures during differentiation of mouse hippocampal neurons in primary culture
GSE163753 A comparative analysis of reactive Müller glia gene expression after light damage and microRNA-depleted Müller glia – focus on microRNAs [Affymetrix]
GSE163754 A comparative analysis of reactive Müller glia gene expression after light damage and microRNA-depleted Müller glia – focus on microRNAs
Data table header descriptions ID probe set ID
GB_LIST GenBank and RefSeq Accessions from mrna_assignment column
SPOT_ID genomic location of the corresponding transcript cluster in the version of the genome assembly used at annotation time. Coordinates are standard 1-based (length=stop-start+1).
seqname chromosome number
RANGE_GB NCBI RefSeq for chromosome of current build
RANGE_STRAND strand (+|-)
RANGE_START start (integer). Coordinates are standard 1-based (length=stop-start+1).
RANGE_STOP stop (integer). Coordinates are standard 1-based (length=stop-start+1).
probe_count Total number of probes in the probe set.
transcript_cluster_id Unique identifier for the transcript cluster containing the probe set.
exon_id Unique identifier for the exon cluster containing the probe set.
psr_id Unique identifier for the probe selection region containing the probe set.
gene_assignment Gene name(s) for each assigned mRNA for mRNAs that corresponds to known genes.
mrna_assignment Public mRNAs that should be detected by this probe set based on sequence alignment determined at the time of the current NetAffx annotation update.
probeset_type Array design category of the probe set.
Data table ID GB_LIST SPOT_ID seqname RANGE_GB RANGE_STRAND RANGE_START RANGE_STOP probe_count transcript_cluster_id exon_id psr_id gene_assignment mrna_assignment probeset_type 10338001 control
622
---
control->affx
10338002 control
454
---
control->bgp->antigenomic
10338003 control
723
---
control->affx
10338004 control
20
--- // AFFX-BioB-3_at, bac_spike // --- // --- // --- // ---
control->affx
10338005 control
477
---
control->bgp->antigenomic
10338006 control
468
---
control->bgp->antigenomic
10338007 control
489
---
control->bgp->antigenomic
10338008 control
479
---
control->bgp->antigenomic
10338009 control
136
---
control->bgp->antigenomic
10338010 control
463
---
control->bgp->antigenomic
10338011 control
470
---
control->bgp->antigenomic
10338012 control
484
---
control->bgp->antigenomic
10338013 control
162
---
control->bgp->antigenomic
10338014 control
431
---
control->bgp->antigenomic
10338015 control
355
---
control->bgp->antigenomic
10338016 control
347
---
control->bgp->antigenomic
10338017 control
20
--- // AFFX-CreX-5_at, bac_spike // --- // --- // --- // ---
control->affx
10338018 control
430
---
control->bgp->antigenomic
10338019 control
480
---
control->bgp->antigenomic
10338020 control
204
---
control->bgp->antigenomic
241576 97364 Kbytes .Supplementary data files not provided
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