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Items: 1 to 20 of 38

1.

Dynamic co-evolution of transposable elements and the piRNA pathway in East African cichlid fishes [smallRNA-seq]

(Submitter supplied) East African cichlid fishes have diversified in an explosive fashion, but the (epi)genetic basis of the phenotypic diversity of these fishes remains largely unknown. Although transposable elements (TEs) have been associated with phenotypic variation in cichlids, little is known about their transcriptional activity and epigenetic silencing. Here, we describe dynamic patterns of TE expression in African cichlid gonads and during early development. more...
Organism:
Astatotilapia calliptera; Pundamilia nyererei; Oreochromis niloticus; Haplochromis burtoni; Maylandia zebra; Tropheops sp. 'mauve'
Type:
Non-coding RNA profiling by high throughput sequencing
6 related Platforms
31 Samples
Download data: TXT
Series
Accession:
GSE252804
ID:
200252804

PubMed Full text in PMC Similar studies

2.

Illumina NovaSeq 6000 (Pundamilia nyererei)

Organism:
Pundamilia nyererei
2 Series
13 Samples
Download data
Platform
Accession:
GPL34069
ID:
100034069

3.

Illumina NovaSeq 6000 (Haplochromis burtoni)

Organism:
Haplochromis burtoni
2 Series
12 Samples
Download data
Platform
Accession:
GPL34068
ID:
100034068

4.

Illumina NovaSeq 6000 (Tropheops sp. 'mauve')

Organism:
Tropheops sp. 'mauve'
2 Series
8 Samples
Download data
Platform
Accession:
GPL34067
ID:
100034067

5.

Illumina NovaSeq 6000 (Maylandia zebra)

Organism:
Maylandia zebra
2 Series
4 Samples
Download data
Platform
Accession:
GPL34066
ID:
100034066

6.

Illumina NovaSeq 6000 (Astatotilapia calliptera)

Organism:
Astatotilapia calliptera
3 Series
37 Samples
Download data
Platform
Accession:
GPL30104
ID:
100030104

7.

Illumina NovaSeq 6000 (Oreochromis niloticus)

Organism:
Oreochromis niloticus
4 Series
30 Samples
Download data
Platform
Accession:
GPL29385
ID:
100029385

8.

A. calliptera, testes, rep4 [smallRNA-seq]

Organism:
Astatotilapia calliptera
Source name:
Testes
Platform:
GPL30104
Series:
GSE252804
Download data
Sample
Accession:
GSM8008028
ID:
308008028

SRA Run Selector

9.

A. calliptera, testes, rep3 [smallRNA-seq]

Organism:
Astatotilapia calliptera
Source name:
Testes
Platform:
GPL30104
Series:
GSE252804
Download data
Sample
Accession:
GSM8008027
ID:
308008027

SRA Run Selector

10.

A. calliptera, testes, rep2 [smallRNA-seq]

Organism:
Astatotilapia calliptera
Source name:
Testes
Platform:
GPL30104
Series:
GSE252804
Download data
Sample
Accession:
GSM8008026
ID:
308008026

SRA Run Selector

11.

A. calliptera, testes, rep1 [smallRNA-seq]

Organism:
Astatotilapia calliptera
Source name:
Testes
Platform:
GPL30104
Series:
GSE252804
Download data
Sample
Accession:
GSM8008025
ID:
308008025

SRA Run Selector

12.

A. calliptera, ovary, rep3 [smallRNA-seq]

Organism:
Astatotilapia calliptera
Source name:
Ovary
Platform:
GPL30104
Series:
GSE252804
Download data
Sample
Accession:
GSM8008024
ID:
308008024

SRA Run Selector

13.

A. calliptera, ovary, rep2 [smallRNA-seq]

Organism:
Astatotilapia calliptera
Source name:
Ovary
Platform:
GPL30104
Series:
GSE252804
Download data
Sample
Accession:
GSM8008023
ID:
308008023

SRA Run Selector

14.

A. calliptera, ovary, rep1 [smallRNA-seq]

Organism:
Astatotilapia calliptera
Source name:
Ovary
Platform:
GPL30104
Series:
GSE252804
Download data
Sample
Accession:
GSM8008022
ID:
308008022

SRA Run Selector

15.

A. calliptera, muscle, rep2 [smallRNA-seq]

Organism:
Astatotilapia calliptera
Source name:
Muscle
Platform:
GPL30104
Series:
GSE252804
Download data
Sample
Accession:
GSM8008021
ID:
308008021

SRA Run Selector

16.

O. niloticus, testes, rep3 [smallRNA-seq]

Organism:
Oreochromis niloticus
Source name:
Testes
Platform:
GPL29385
Series:
GSE252804
Download data
Sample
Accession:
GSM8008051
ID:
308008051

SRA Run Selector

17.

O. niloticus, testes, rep2 [smallRNA-seq]

Organism:
Oreochromis niloticus
Source name:
Testes
Platform:
GPL29385
Series:
GSE252804
Download data
Sample
Accession:
GSM8008050
ID:
308008050

SRA Run Selector

18.

O. niloticus, testes, rep1 [smallRNA-seq]

Organism:
Oreochromis niloticus
Source name:
Testes
Platform:
GPL29385
Series:
GSE252804
Download data
Sample
Accession:
GSM8008049
ID:
308008049

SRA Run Selector

19.

O. niloticus, ovary, rep3 [smallRNA-seq]

Organism:
Oreochromis niloticus
Source name:
Ovary
Platform:
GPL29385
Series:
GSE252804
Download data
Sample
Accession:
GSM8008048
ID:
308008048

SRA Run Selector

20.

O. niloticus, ovary, rep2 [smallRNA-seq]

Organism:
Oreochromis niloticus
Source name:
Ovary
Platform:
GPL29385
Series:
GSE252804
Download data
Sample
Accession:
GSM8008047
ID:
308008047

SRA Run Selector

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