nsv3116797
- Organism: Homo sapiens
- Study:nstd145 (Lu et al. 2017)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:176,004
- Publication(s):Lu et al. 2017
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 575 SVs from 65 studies. See in: genome view
Overlapping variant regions from other studies: 578 SVs from 65 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3116797 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000022.11 | Chr22 | 34,342,080 | 34,518,083 |
| nsv3116797 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000022.10 | Chr22 | 34,738,070 | 34,914,075 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv14103086 | deletion | sample308 | Oligo aCGH | Probe signal intensity | 60 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv14103086 | Remapped | Good | NC_000022.11:g.(?_ 34342080)_(3451808 3_?)del | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 34,342,080 | 34,518,083 |
| nssv14103086 | Submitted genomic | NC_000022.10:g.(?_ 34738070)_(3491407 5_?)del | GRCh37 (hg19) | NC_000022.10 | Chr22 | 34,738,070 | 34,914,075 |