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dbVar

Database of genomic structural variation

nsv3113527

Organism: Homo sapiens

Study:nstd145 (Lu et al. 2017)
Variant Type:copy number variation
Method Type:Oligo aCGH
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:5,940

Publication(s):Lu et al. 2017

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 400 SVs from 78 studies. See in: genome view

Remapped(Score: Perfect):110,542,840-110,548,779

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv3113527	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000007.14	Chr7	110,542,840	110,548,779
nsv3113527	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000007.13	Chr7	110,182,897	110,188,836

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14084187	deletion	sample127	Oligo aCGH	Probe signal intensity	60
nssv14084829	duplication	sample44	Oligo aCGH	Probe signal intensity	90

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv14084187	Remapped	Perfect	NC_000007.14:g.(?_ 110542840)_(110548 779_?)del	GRCh38.p12	First Pass	NC_000007.14	Chr7	110,542,840	110,548,779
nssv14084829	Remapped	Perfect	NC_000007.14:g.(?_ 110542840)_(110548 779_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	110,542,840	110,548,779
nssv14084187	Submitted genomic		NC_000007.13:g.(?_ 110182897)_(110188 836_?)del	GRCh37 (hg19)		NC_000007.13	Chr7	110,182,897	110,188,836
nssv14084829	Submitted genomic		NC_000007.13:g.(?_ 110182897)_(110188 836_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	110,182,897	110,188,836

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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