nsv3111213
- Organism: Homo sapiens
- Study:nstd145 (Lu et al. 2017)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:121,021
- Publication(s):Lu et al. 2017
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 4220 SVs from 100 studies. See in: genome view
Overlapping variant regions from other studies: 4213 SVs from 100 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3111213 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | 20,299,753 | 20,420,773 |
| nsv3111213 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000015.9 | Chr15 | 20,505,006 | 20,626,026 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv14097125 | duplication | sample312 | Oligo aCGH | Probe signal intensity | 89 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv14097125 | Remapped | Perfect | NC_000015.10:g.(?_ 20299753)_(2042077 3_?)dup | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 20,299,753 | 20,420,773 |
| nssv14097125 | Submitted genomic | NC_000015.9:g.(?_2 0505006)_(20626026 _?)dup | GRCh37 (hg19) | NC_000015.9 | Chr15 | 20,505,006 | 20,626,026 |