nsv3110565
- Organism: Homo sapiens
- Study:nstd145 (Lu et al. 2017)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:244,796
- Publication(s):Lu et al. 2017
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1122 SVs from 73 studies. See in: genome view
Overlapping variant regions from other studies: 1122 SVs from 73 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3110565 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000016.10 | Chr16 | 6,384,960 | 6,629,755 |
| nsv3110565 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000016.9 | Chr16 | 6,434,961 | 6,679,756 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv14096344 | deletion | sample234 | Oligo aCGH | Probe signal intensity | 93 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv14096344 | Remapped | Perfect | NC_000016.10:g.(?_ 6384960)_(6629755_ ?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 6,384,960 | 6,629,755 |
| nssv14096344 | Submitted genomic | NC_000016.9:g.(?_6 434961)_(6679756_? )del | GRCh37 (hg19) | NC_000016.9 | Chr16 | 6,434,961 | 6,679,756 |