nsv1153177
- Organism: Homo sapiens
- Study:nstd107 (John et al. 2014)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:965
- Publication(s):John et al. 2014
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 324 SVs from 38 studies. See in: genome view
Overlapping variant regions from other studies: 324 SVs from 38 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv1153177 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000021.9 | Chr21 | 17,580,806 | 17,581,770 |
| nsv1153177 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000021.8 | Chr21 | 18,953,124 | 18,954,088 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv4001094 | inversion | KWB1 | Sequencing | Read depth and paired-end mapping | 8,440 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv4001094 | Remapped | Perfect | NC_000021.9:g.(175 80806_?)_(?_175817 70)inv | GRCh38.p12 | First Pass | NC_000021.9 | Chr21 | 17,580,806 | 17,581,770 |
| nssv4001094 | Submitted genomic | NC_000021.8:g.(189 53124_?)_(?_189540 88)inv | GRCh37 (hg19) | NC_000021.8 | Chr21 | 18,953,124 | 18,954,088 |