esv6009
- Organism: Homo sapiens
- Study:estd19 (Ahn et al. 2009)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:11,093
- Publication(s):Ahn et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 583 SVs from 56 studies. See in: genome view
Overlapping variant regions from other studies: 583 SVs from 56 studies. See in: genome view
Overlapping variant regions from other studies: 352 SVs from 16 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| esv6009 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 18,558,475 | 18,558,978 | 18,569,448 | 18,569,567 |
| esv6009 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000010.10 | Chr10 | 18,847,404 | 18,847,907 | 18,858,377 | 18,858,496 |
| esv6009 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000010.9 | Chr10 | 18,887,410 | 18,887,913 | 18,898,383 | 18,898,502 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| essv28450 | inversion | Sequencing | Read depth and paired-end mapping |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv28450 | Remapped | Perfect | NC_000010.11:g.(18 558475_18558978)_( 18569448_18569567) inv | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 18,558,475 | 18,558,978 | 18,569,448 | 18,569,567 |
| essv28450 | Remapped | Perfect | NC_000010.10:g.(18 847404_18847907)_( 18858377_18858496) inv | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 18,847,404 | 18,847,907 | 18,858,377 | 18,858,496 |
| essv28450 | Submitted genomic | NC_000010.9:g.(188 87410_18887913)_(1 8898383_18898502)i nv | NCBI36 (hg18) | NC_000010.9 | Chr10 | 18,887,410 | 18,887,913 | 18,898,383 | 18,898,502 |