esv9725
- Organism: Homo sapiens
- Study:estd19 (Ahn et al. 2009)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:6,920
- Publication(s):Ahn et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 314 SVs from 36 studies. See in: genome view
Overlapping variant regions from other studies: 314 SVs from 36 studies. See in: genome view
Overlapping variant regions from other studies: 127 SVs from 16 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| esv9725 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000018.10 | Chr18 | 20,933,069 | 20,933,105 | 20,939,445 | 20,939,988 |
| esv9725 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000018.9 | Chr18 | 18,513,030 | 18,513,066 | 18,519,406 | 18,519,949 |
| esv9725 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000018.8 | Chr18 | 16,767,028 | 16,767,064 | 16,773,404 | 16,773,947 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| essv32166 | inversion | Sequencing | Read depth and paired-end mapping |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv32166 | Remapped | Perfect | NC_000018.10:g.(20 933069_20933105)_( 20939445_20939988) inv | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 20,933,069 | 20,933,105 | 20,939,445 | 20,939,988 |
| essv32166 | Remapped | Perfect | NC_000018.9:g.(185 13030_18513066)_(1 8519406_18519949)i nv | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 18,513,030 | 18,513,066 | 18,519,406 | 18,519,949 |
| essv32166 | Submitted genomic | NC_000018.8:g.(167 67028_16767064)_(1 6773404_16773947)i nv | NCBI36 (hg18) | NC_000018.8 | Chr18 | 16,767,028 | 16,767,064 | 16,773,404 | 16,773,947 |