Halogranum rubrum gen. nov., sp. nov., a halophilic archaeon isolated from a marine solar saltern

Int J Syst Evol Microbiol. 2010 Jun;60(Pt 6):1366-1371. doi: 10.1099/ijs.0.014928-0. Epub 2009 Aug 11.

Abstract

Two extremely halophilic archaea, strains RO2-11(T) and HO2-1, were isolated from two Chinese marine solar salterns, Rudong solar saltern and Haimen solar saltern, respectively. Cells of the two strains were polymorphic and Gram-stain-negative; colonies were red-pigmented. The two strains grew at NaCl concentrations of 2.6-4.3 M (optimum 3.9 M) and required at least 0.1 M Mg2+ for growth. They were able to grow over a pH range of 6.0-8.0 and a temperature range of 20-50 degrees C, with optimal pH of 7.5 and optimal temperature of 37 degrees C. The major polar lipids of strain RO2-11(T) and strain HO2-1 were phosphatidylglycerol, phosphatidylglycerol phosphate methyl ester and three glycolipids, two of them chromatographically identical to S-DGD-1 and DGD-1, the third unidentified. The 16S rRNA gene sequence similarity of strain RO2-11(T) and strain HO2-1 was 99.3 % and highest sequence similarity with the closest relative (Haloferax larsenii) was 91.4 %. Based on the data obtained, the two isolates could not be classified in any recognized genus of the family Halobacteriaceae. Strain RO2-11(T) and strain HO2-1 are thus considered to represent a novel species of a new genus within the family Halobacteriaceae, for which the name Halogranum rubrum gen. nov., sp. nov. is proposed. The type strain is RO2-11(T) (=CGMCC 1.7738(T) =JCM 15772(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Archaea / classification*
  • Archaea / genetics
  • Archaea / isolation & purification
  • Base Composition
  • Gelatin / metabolism
  • Glycerol / metabolism
  • Halobacteriaceae / classification*
  • Halobacteriaceae / genetics
  • Halobacteriaceae / isolation & purification
  • Haloferax / classification
  • Haloferax / genetics
  • Haloferax / isolation & purification
  • Molecular Sequence Data
  • Phenotype
  • Phylogeny
  • RNA, Bacterial / genetics
  • RNA, Ribosomal, 16S / genetics
  • Seawater / microbiology
  • Starch / metabolism

Substances

  • RNA, Bacterial
  • RNA, Ribosomal, 16S
  • Gelatin
  • Starch
  • Glycerol

Associated data

  • GENBANK/EU887283
  • GENBANK/FJ889134