Halorubrum orientale sp. nov., a halophilic archaeon isolated from Lake Ejinor, Inner Mongolia, China

Int J Syst Evol Microbiol. 2006 Nov;56(Pt 11):2559-2563. doi: 10.1099/ijs.0.64420-0.

Abstract

A motile, pleomorphic, red-pigmented archaeon, strain EJ-52T, was isolated from water from Lake Ejinor, a saline lake in Inner Mongolia, China. Analysis of the almost-complete 16S rRNA gene sequence showed that the isolate was phylogenetically related to species of the genus Halorubrum, being most closely related to Halorubrum saccharovorum ATCC 29252T (96.1% sequence similarity), Halorubrum lacusprofundi JCM 8891T (95.9%), Halorubrum tibetense AS 1.3239T (95.2%), Halorubrum alcaliphilum AS 1.3528T (95.2%) and Halorubrum vacuolatum JCM 9060T (95.1%). The polar lipids of strain EJ-52T were C20C20 derivatives of phosphatidylglycerol phosphate and phosphatidylglycerol phosphate methyl ester and a sulfated diglycosyl diether. Strain EJ-52T requires at least 2.5 M NaCl for growth and grows optimally at 3.4 M NaCl. The strain grows at 25-50 degrees C, with optimal growth occurring at 35-45 degrees C. Mg2+ is not required. The DNA G+C content is 64.2 mol%. On the basis of the data obtained in this study, strain EJ52T represents a novel species, for which the name Halorubrum orientale sp. nov. is proposed. The type strain is EJ-52T (=CECT 7145T=JCM 13889T=CGMCC 1.6295T).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Composition
  • China
  • DNA, Archaeal / chemistry
  • DNA, Archaeal / genetics
  • DNA, Archaeal / isolation & purification
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / isolation & purification
  • Genes, rRNA
  • Halobacteriaceae / classification*
  • Halobacteriaceae / cytology
  • Halobacteriaceae / isolation & purification*
  • Halobacteriaceae / physiology
  • Lipids / analysis
  • Lipids / chemistry
  • Magnesium / metabolism
  • Molecular Sequence Data
  • Movement
  • Phylogeny
  • Pigments, Biological / analysis
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Sequence Homology, Nucleic Acid
  • Sodium Chloride / analysis
  • Sodium Chloride / metabolism
  • Temperature
  • Water Microbiology*

Substances

  • DNA, Archaeal
  • DNA, Ribosomal
  • Lipids
  • Pigments, Biological
  • RNA, Ribosomal, 16S
  • Sodium Chloride
  • Magnesium

Associated data

  • GENBANK/AM235786