Methanosaeta harundinacea sp. nov., a novel acetate-scavenging methanogen isolated from a UASB reactor

Int J Syst Evol Microbiol. 2006 Jan;56(Pt 1):127-31. doi: 10.1099/ijs.0.63887-0.

Abstract

Two methanogenic strains, 8AcT and 6Ac, were isolated from an upflow anaerobic sludge blanket reactor treating beer-manufacture wastewater in Beijing, China. Cells of strains 8AcT and 6Ac were rod-shaped (0.8-1.0 x 3-5 microm) and non-motile, occurring singly or in pairs; however, at high cell density the cells were arranged in long chains within a common sheath. The two strains used acetate exclusively for growth and methane production. The specific growth rate of strain 8AcT was 0.030 h(-1) when growing in acetate (20 mM) at 37 degrees C. The temperature range for growth was 25-45 degrees C, with the fastest growth at 34-37 degrees C. The pH range for growth and methane production was 6.5-9.0, with the fastest growth at pH 7.2-7.6. The G+C content of genomic DNA of strain 8AcT was 55.7 mol%. Phylogenetic analysis based on 16S rRNA gene sequence similarity showed that the novel strains clustered with Methanosaeta species; the 16S rRNA gene sequence similarities between strain 8AcT and Methanosaeta concilii DSM 3013 and 'Methanosaeta thermophila' DSM 6194 were 92.5 and 87.3 %, respectively. The sequence similarity levels of mcrA, the gene encoding the alpha-subunit of methyl-coenzyme M reductase, and of the deduced amino acids of mcrA, between strain 8AcT and Methanosaeta concilii DSM 3671T were 36 and 78.9 %, respectively. Based on the phylogenetic and phenotypic analyses, the novel species Methanosaeta harundinacea sp. nov. is proposed, with strain 8AcT (= JCM 13211T = CGMCC 1.5026T) as the type strain.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acetates / metabolism
  • Anaerobiosis
  • Base Composition
  • Beer
  • Bioreactors*
  • China
  • Culture Media
  • DNA Restriction Enzymes / genetics
  • Hydrogen-Ion Concentration
  • Methane / metabolism
  • Methanosarcinaceae / chemistry
  • Methanosarcinaceae / classification*
  • Methanosarcinaceae / isolation & purification
  • Methanosarcinaceae / physiology
  • Molecular Sequence Data
  • Oxidoreductases / genetics
  • Oxidoreductases / metabolism
  • RNA, Bacterial / genetics
  • RNA, Ribosomal, 16S / genetics
  • Sequence Homology, Nucleic Acid
  • Sewage / microbiology*
  • Species Specificity

Substances

  • Acetates
  • Culture Media
  • RNA, Bacterial
  • RNA, Ribosomal, 16S
  • Sewage
  • Oxidoreductases
  • DNA Restriction Enzymes
  • endodeoxyribonuclease McrA
  • Methane

Associated data

  • GENBANK/AY817738
  • GENBANK/AY970347
  • GENBANK/AY970348
  • GENBANK/AY970349