Methanobacterium oryzae sp. nov., a novel methanogenic rod isolated from a Philippines ricefield

Int J Syst Evol Microbiol. 2000 Mar:50 Pt 2:525-528. doi: 10.1099/00207713-50-2-525.

Abstract

A rod (0.3-0.4 micron x 3-10 microns) to filamentous (up to 40 microns) non-motile methanogenic bacterium, designated strain FPiT (T = type strain), was isolated from ricefield soil in the Philippines. The strain uses H2 + CO2 or formate for growth and produces CH4. Optimum growth temperature is 40 degrees C; no growth is observed at 15 degrees C or 45 degrees C. Optimum pH for growth is 7; no growth is observed at pH 5.5 or 9.0. Strain FPiT is halotolerant and grows at NaCl concentrations of 0-25 g l-1. The G + C content of its DNA is 31 mol%. Based on 16S rRNA gene sequence analysis, the isolate was identified as a new species of the genus Methanobacterium: Methanobacterium oryzae sp. nov. The type strain is FPiT (= DSM 11106T).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Agriculture
  • Base Composition
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • Genes, rRNA
  • Methane / metabolism
  • Methanobacterium / classification*
  • Methanobacterium / genetics
  • Methanobacterium / isolation & purification
  • Methanobacterium / physiology
  • Molecular Sequence Data
  • Oryza*
  • Philippines
  • Phylogeny
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Soil Microbiology*
  • Temperature

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • RNA, Ribosomal, 16S
  • Methane

Associated data

  • GENBANK/AF028690
  • GENBANK/AF093061