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Select item 79387701.

BraInMap elucidates the macromolecular connectivity landscape of mammalian brain

Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili

Cell Syst. Author manuscript; available in PMC 2021 Apr 22.

Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003

Correction in:: Cell Syst. 2020 Aug 26; 11(2): 208.

PMCID:: PMC7938770

Abstract Article PDF–2.0M

Select item 62441832.

Complementary proteomics strategies capture an ataxin-1 interactome in Neuro-2a cells

Sunyuan Zhang, Nicholas A. Williamson, Marie A. Bogoyevitch

Sci Data. 2018; 5: 180262. Published online 2018 Nov 20. doi: 10.1038/sdata.2018.262

PMCID:: PMC6244183

Abstract Article PDF–753K

Select item 53376183.

Spatiotemporal Analysis of a Glycolytic Activity Gradient Linked to Mouse Embryo Mesoderm Development

Vinay Bulusu, Nicole Prior, Marteinn T. Snaebjornsson, Andreas Kuehne, Katharina F. Sonnen, Jana Kress, Frank Stein, Carsten Schultz, Uwe Sauer, Alexander Aulehla

Dev Cell. 2017 Feb 27; 40(4): 331–341.e4. doi: 10.1016/j.devcel.2017.01.015

PMCID:: PMC5337618

Abstract Article

Select item 44354284.

A Systematic Analysis of a Deep Mouse Epididymal Sperm Proteome

Theodore Chauvin, Fang Xie, Tao Liu, Carrie D. Nicora, Feng Yang, David G. Camp, II, Richard D. Smith, Kenneth P. Roberts

Biol Reprod. 2012 Dec; 87(6): 141. Published online 2012 Oct 31. doi: 10.1095/biolreprod.112.104208

PMCID:: PMC4435428

Abstract Article PDF–266K

Select item 38914035.

Sequence-Specific Promoter Elements Regulate Temporal-Specific Changes in Chromatin Required for Testis-Specific Activation of the Pgk2 Gene

Zhangsheng Yang, Hirotaka Yoshioka, John R. McCarrey

Reproduction. Author manuscript; available in PMC 2014 Sep 4.

Published in final edited form as: Reproduction. 2013; 146(5): 501–516. Published online 2013 Oct 4. doi: 10.1530/REP-13-0311

PMCID:: PMC3891403

Abstract Article PDF–1.9M

Select item 33599766.

KATNAL1 Regulation of Sertoli Cell Microtubule Dynamics Is Essential for Spermiogenesis and Male Fertility

Lee B. Smith, Laura Milne, Nancy Nelson, Sharon Eddie, Pamela Brown, Nina Atanassova, Moira K. O'Bryan, Liza O'Donnell, Danielle Rhodes, Sara Wells, Diane Napper, Patrick Nolan, Zuzanna Lalanne, Michael Cheeseman, Josephine Peters

PLoS Genet. 2012 May; 8(5): e1002697. Published online 2012 May 24. doi: 10.1371/journal.pgen.1002697

PMCID:: PMC3359976

Abstract Article PDF–7.7M

Select item 31780597.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 29351998.

Generation of functional multipotent adult stem cells from GPR125⁺ germline progenitors

Marco Seandel, Daylon James, Sergey V. Shmelkov, Ilaria Falciatori, Jiyeon Kim, Sai Chavala, Douglas S. Scherr, Fan Zhang, Richard Torres, Nicholas W. Gale, George D. Yancopoulos, Andrew Murphy, David M. Valenzuela, Robin M. Hobbs, Pier Paolo Pandolfi, Shahin Rafii

Nature. Author manuscript; available in PMC 2010 Sep 7.

Published in final edited form as: Nature. 2007 Sep 20; 449(7160): 346–350. doi: 10.1038/nature06129

PMCID:: PMC2935199

Abstract Article PDF–2.4M

Select item 28021189.

Phosphoglycerate Kinase 2 (PGK2) Is Essential for Sperm Function and Male Fertility in Mice

Polina V. Danshina, Christopher B. Geyer, Qunsheng Dai, Eugenia H. Goulding, William D. Willis, G. Barrie Kitto, John R. McCarrey, E.M. Eddy, Deborah A. O'Brien

Biol Reprod. 2010 Jan; 82(1): 136–145. Published online 2009 Sep 16. doi: 10.1095/biolreprod.109.079699

PMCID:: PMC2802118

Abstract Article PDF–5.0M

Select item 260278210.

A cytoplasmic variant of the KH-type splicing regulatory protein serves as a decay-promoting factor for phosphoglycerate kinase 2 mRNA in murine male germ cells

Mingang Xu, John R. McCarrey, Norman B. Hecht

Nucleic Acids Res. 2008 Dec; 36(22): 7157–7167. Published online 2008 Nov 10. doi: 10.1093/nar/gkn800

PMCID:: PMC2602782

Abstract Article PDF–7.9M

Select item 216915311.

In Vivo Analysis of Developmentally and Evolutionarily Dynamic Protein-DNA Interactions Regulating Transcription of the Pgk2 Gene during Mammalian Spermatogenesis

Hirotaka Yoshioka, Christopher B. Geyer, Jacey L. Hornecker, Krishan T. Patel, John R. McCarrey

Mol Cell Biol. 2007 Nov; 27(22): 7871–7885. Published online 2007 Sep 17. doi: 10.1128/MCB.00990-07

PMCID:: PMC2169153

Abstract Article PDF–2.4M

Select item 141356812.

BGEM: An In Situ Hybridization Database of Gene Expression in the Embryonic and Adult Mouse Nervous System

Susan Magdaleno, Patricia Jensen, Craig L Brumwell, Anna Seal, Karen Lehman, Andrew Asbury, Tony Cheung, Tommie Cornelius, Diana M Batten, Christopher Eden, Shannon M Norland, Dennis S Rice, Nilesh Dosooye, Sundeep Shakya, Perdeep Mehta, Tom Curran

PLoS Biol. 2006 Apr; 4(4): e86. Published online 2006 Mar 28. doi: 10.1371/journal.pbio.0040086

PMCID:: PMC1413568

Article PDF–99K

Select item 119032013.

Infertility with Defective Spermiogenesis in Mice Lacking AF5q31, the Target of Chromosomal Translocation in Human Infant Leukemia

Atsushi Urano, Masaki Endoh, Tadashi Wada, Yoshihiro Morikawa, Miyuki Itoh, Yuki Kataoka, Tomohiko Taki, Hiroshi Akazawa, Hideaki Nakajima, Issei Komuro, Nobuaki Yoshida, Yasuhide Hayashi, Hiroshi Handa, Toshio Kitamura, Tetsuya Nosaka

Mol Cell Biol. 2005 Aug; 25(15): 6834–6845. doi: 10.1128/MCB.25.15.6834-6845.2005

PMCID:: PMC1190320

Abstract Article PDF–1.7M

Select item 52892814.

The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)

Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504

Correction in:: Genome Res. 2006 Jun; 16(6): 804.

PMCID:: PMC528928

Abstract Article PDF–140K

Select item 52164215.

Lsh, an epigenetic guardian of repetitive elements

Jiaqiang Huang, Tao Fan, Qingsheng Yan, Heming Zhu, Stephen Fox, Haleem J. Issaq, Lionel Best, Lisa Gangi, David Munroe, Kathrin Muegge

Nucleic Acids Res. 2004; 32(17): 5019–5028. Published online 2004 Sep 24. doi: 10.1093/nar/gkh821

PMCID:: PMC521642

Abstract Article PDF–326K

Select item 40206016.

Genetic and molecular mapping of the Hmt region of mouse.

S Richards, M Bucan, K Brorson, M C Kiefer, S W Hunt, 3rd, H Lehrach, K F Lindahl

EMBO J. 1989 Dec 1; 8(12): 3749–3757. doi: 10.1002/j.1460-2075.1989.tb08551.x

PMCID:: PMC402060

Summary Page Browse PDF–1.8M

Select item 39174217.

Mep-1 gene controlling a kidney metalloendopeptidase is linked to the major histocompatibility complex in mice.

J S Bond, R J Beynon, J F Reckelhoff, C S David

Proc Natl Acad Sci U S A. 1984 Sep; 81(17): 5542–5545. doi: 10.1073/pnas.81.17.5542

PMCID:: PMC391742

Summary Page Browse PDF–672K

Select item 36958318.

Protein-DNA interactions associated with the onset of testis-specific expression of the mammalian Pgk-2 gene.

M M Gebara, J R McCarrey

Mol Cell Biol. 1992 Apr; 12(4): 1422–1431. doi: 10.1128/mcb.12.4.1422

PMCID:: PMC369583

Summary Page Browse PDF–2.3M

Select item 36794319.

The testis-specific phosphoglycerate kinase gene pgk-2 is a recruited retroposon.

P H Boer, C N Adra, Y F Lau, M W McBurney

Mol Cell Biol. 1987 Sep; 7(9): 3107–3112. doi: 10.1128/mcb.7.9.3107

PMCID:: PMC367943

Summary Page Browse PDF–1.2M

Select item 31099220.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

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