GEO Browser - GEO

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46 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			FASTA
GSE209986	Heritable human Polycomb silencing is locus-dependent and requires H2AK119ub1 self-propagation	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	48	BW FASTA	Danesh Moazed	May 15, 2024
GSE248428	Identification of a novel, tunable interface in the S.pombe HP1 protein, Swi6, that underpins epigenetic inheritance.	Genome binding/occupancy profiling by high throughput sequencing	Schizosaccharomyces pombe	28	BEDGRAPH FASTA GFF	Melissa Seman	Nov 27, 2023
GSE218878	Chromatin profile of Anthoceros agrestis	Genome binding/occupancy profiling by high throughput sequencing	Anthoceros agrestis	18	BROADPEAK BW FASTA GFF GFF3 XLSX	Tetsuya Hisanaga	Nov 10, 2023
GSE196149	Condensin positioning at telomeres by shelterin proteins drives sister-telomere disjunction in anaphase	Genome binding/occupancy profiling by high throughput sequencing Other	Schizosaccharomyces pombe	28	BED BIGWIG BW FASTA TXT	Pascal BERNARD	Oct 02, 2023
GSE244017	Uncoupling the distinct functions of HP1 proteins during heterochromatin establishment and maintenance	Genome binding/occupancy profiling by high throughput sequencing	Schizosaccharomyces pombe	87	BW FA FASTA GFF GFF3	Melissa Seman	Sep 26, 2023
GSE199946	A histone deacetylase network regulates epigenetic reprogramming and viral silencing in HIV infected cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	45	BW FA FASTA GTF	Jeremy Simon	Aug 08, 2023
GSE231618	The establishment of HP1-independent heterochromatin reveals an essential role for HP1 proteins in maintaining epigenetic memory	Genome binding/occupancy profiling by high throughput sequencing	Schizosaccharomyces pombe	24	BW FA FASTA GFF GFF3	Melissa Seman	May 10, 2023
GSE203279	The histone demethylase KDM3 prevents auto-immune piRNAs production in Drosophila	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Drosophila melanogaster	50	BIGWIG FASTA TXT	Antoine Boivin	Feb 07, 2023
GSE224562	Genome-wide mapping of cleavage sites induced by topoisomerase IV in E. coli with a single-nucleotide resolution	Genome binding/occupancy profiling by high throughput sequencing	Escherichia coli	24	FASTA TXT WIG	Dmitry Sutormin	Feb 05, 2023
GSE213639	A modular CRISPR screen identifies individual and combination pathways contributing to HIV-1 latency	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	89	BW FASTA PDF	Jorja Henikoff	Dec 26, 2022
GSE206608	Genome-wide mapping of fluoroquinolone-induced gyrase cleavage sites displays drug specific effects that correlate with bacterial persistence	Genome binding/occupancy profiling by high throughput sequencing	Escherichia coli	72	FA FASTA TXT	Juechun Tang	Dec 05, 2022
GSE206874	Nuclear functions of KaeA, the subunit of KEOPS complex in Aspergillus nidulans	Genome binding/occupancy profiling by high throughput sequencing	Aspergillus nidulans	6	BED FASTA TSV TXT	Agnieszka Dzikowska	Oct 28, 2022
GSE193224	A giant virus genome is densely packaged by stable nucleosomes	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Marseillevirus marseillevirus synthetic construct	117	BED BEDGRAPH BIGWIG FASTA PDF	Jorja Henikoff	Sep 27, 2022
GSE184126	The developmental transcriptome and epigenome of Owenia fusiformis reveal the development and evolution of mitraria larvae	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Owenia fusiformis	26	FASTA NARROWPEAK TXT SRA Run Selector	Yan Liang	May 04, 2022
GSE163680	Genome-wide distribution of Tus-GFP in KRX E. coli	Genome binding/occupancy profiling by high throughput sequencing	Escherichia coli KRX	2	FASTA TXT SRA Run Selector	Patrick Schaeffer	Dec 01, 2021
GSE150800	Chromosomal Mcm2-7 distribution and the genome replication program in species from yeast to humans	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus x Mus spretus Saccharomyces cerevisiae Schizosaccharomyces pombe	22	BEDGRAPH FASTA TXT SRA Run Selector	Eric Jan Foss	May 18, 2021
GSE161684	Role of hNABP2 (hSSB1) in transcriptional regulation	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	30	BED BIGWIG CSV FASTA NARROWPEAK TXT SRA Run Selector	Yuliang Wu	Nov 18, 2020
GSE156868	Molecular basis of CTCF binding polarity in genome folding	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	161	BED COOL FASTA TXT SRA Run Selector	Elphege Nora	Aug 30, 2020
GSE152502	Interactive analysis of single-cell epigenomic landscapes with ChromSCape	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	FASTA TXT SRA Run Selector	Céline Vallot	Jun 16, 2020
GSE135002	Conditional expression of PfAP2-G for controlled massive sexual conversion in Plasmodium falciparum. [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	8	BED BEDGRAPH FASTA SRA Run Selector	Oriol Llorà-Batlle	Jun 10, 2020