Human immunodeficiency virus 1 (ID 10319) - Genome

Human immunodeficiency virus 1
Reference genome: Human immunodeficiency virus 1
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ID: 10319

Organism Overview ; Genome Assembly and Annotation report [499]

Human immunodeficiency virus 1

Human immunodeficiency virus 1 overview

Lineage: Viruses[32585]; Riboviria[7831]; Pararnavirae[270]; Artverviricota[270]; Revtraviricetes[270]; Ortervirales[243]; Retroviridae[107]; Orthoretrovirinae[75]; Lentivirus[12]; Human immunodeficiency virus 1[1]

plasma

Summary

Sequence data:

genome assemblies: 499; sequence reads: 25

Statistics:

median total length (Mb): 0.008955

median protein count: 9

median GC%: 41.6

Publications (limited to 20 most recent records)

Rare HIV-1 transmitted/founder lineages identified by deep viral sequencing contribute to rapid shifts in dominant quasispecies during acute and early infection. Kijak GH, et al. PLoS Pathog 2017 Jul

Representative (genome information for reference and representative genomes)

Reference genome:

Human immunodeficiency virus 1 ViralProj15476

Type	Name	RefSeq	INSDC	Size (Kb)	GC%	Protein	Gene
Chr	-	NC_001802.1	AF033819.3	9.18	42.1	10	10

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Human immunodeficiency virus 1
Human immunodeficiency virus 1

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RefSeq genome for species for Nucleotide (Select 1906382) (1)
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