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    LOC100124204 CD109 antigen [ Nasonia vitripennis (jewel wasp) ]

    Gene ID: 100124204, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC100124204
    Gene description
    CD109 antigen
    See related
    NASONIABASE:NV10485
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nasonia vitripennis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Proctotrupomorpha; Chalcidoidea; Pteromalidae; Pteromalinae; Nasonia
    Also known as
    Mcr
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC100124204 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    104 current Nvit_psr_1.1 (GCF_009193385.2) 5 Unlocalized Scaffold NC_045761.1 (11326376..11336570)
    103 previous assembly Nvit_psr_1 (GCF_009193385.1) 5 Unlocalized Scaffold NW_022279650.1 (11326376..11336570)

    Chromosome 5 - NC_045761.1Genomic Context describing neighboring genes Neighboring gene histone H4 Neighboring gene histone H2B-like Neighboring gene TOX high mobility group box family member 3 Neighboring gene small VCP interacting protein Neighboring gene ubiquinone biosynthesis protein COQ3, mitochondrial Neighboring gene FAD synthase-like Neighboring gene probable tRNA (uracil-O(2)-)-methyltransferase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional and evolutionary insights from the genomes of three parasitoid Nasonia species. Werren JH, et al. Science, 2010 Jan 15. PMID 20075255, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables endopeptidase inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CD109 antigen
    Names
    macroglobulin complement-related

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nasonia vitripennis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Nvit_psr_1.1

    Genomic

    1. NC_045761.1 Reference Nvit_psr_1.1

      Range
      11326376..11336570
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016986535.2 → XP_016842024.1  CD109 antigen

      UniProtKB/TrEMBL
      A0A7M7QNJ2
      Conserved Domains (7) summary
      COG2373
      Location:194 → 450
      YfaS; Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function prediction only]
      cd00112
      Location:805 → 832
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      pfam00207
      Location:858 → 949
      A2M; Alpha-2-macroglobulin family
      pfam07677
      Location:1538 → 1629
      A2M_recep; A-macroglobulin receptor
      pfam07678
      Location:1079 → 1421
      A2M_comp; A-macroglobulin complement component
      pfam07703
      Location:586 → 720
      A2M_N_2; Alpha-2-macroglobulin family N-terminal region
      cl19929
      Location:214 → 314
      A2M_N; MG2 domain

    2. XM_031932471.2 → XP_031788331.1  CD109 antigen

      UniProtKB/TrEMBL
      A0A7M7QNJ2
      Conserved Domains (7) summary
      COG2373
      Location:194 → 450
      YfaS; Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function prediction only]
      cd00112
      Location:805 → 832
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      pfam00207
      Location:858 → 949
      A2M; Alpha-2-macroglobulin family
      pfam07677
      Location:1538 → 1629
      A2M_recep; A-macroglobulin receptor
      pfam07678
      Location:1079 → 1421
      A2M_comp; A-macroglobulin complement component
      pfam07703
      Location:586 → 720
      A2M_N_2; Alpha-2-macroglobulin family N-terminal region
      cl19929
      Location:214 → 314
      A2M_N; MG2 domain
    Nucleotide Protein Strain
    Heading Accession and Version

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