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    IPNVsBgp1 viral protein 1 [ Infectious pancreatic necrosis virus ]

    Gene ID: 956514, updated on 18-Aug-2023

    Summary

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    Gene symbol
    IPNVsBgp1
    Gene description
    viral protein 1
    Locus tag
    IPNVsBgp1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Infectious pancreatic necrosis virus (strain: Jasper serotype)
    Lineage
    Viruses; Riboviria; Orthornavirae; Birnaviridae; Aquabirnavirus; Aquabirnavirus salmonidae
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    Genomic context

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    Location:
    segment: B
    Sequence:
    NC_001916.1 (101..2638)

    NC_001916.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001916.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structure of a VP1-VP3 complex suggests how birnaviruses package the VP1 polymerase. Bahar MW, et al. J Virol, 2013 Mar. PMID 23283942, Free PMC Article
    2. Sequence analysis of infectious pancreatic necrosis virus genome segment B and its encoded VP1 protein: a putative RNA-dependent RNA polymerase lacking the Gly-Asp-Asp motif. Duncan R, et al. Virology, 1991 Apr. PMID 1901682, Free PMC Article
    3. VP3, a structural protein of infectious pancreatic necrosis virus, interacts with RNA-dependent RNA polymerase VP1 and with double-stranded RNA. Pedersen T, et al. J Virol, 2007 Jun. PMID 17428850, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    viral protein 1
    NP_047197.1
    • putative RNA-dependent RNA polymerase; putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001916.1 Reference assembly

      Range
      101..2638
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_047197.1 viral protein 1 [Infectious pancreatic necrosis virus]

      See identical proteins and their annotated locations for NP_047197.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P22173
      UniProtKB/TrEMBL
      A0A2P1H0G8
      Conserved Domains (1) summary
      pfam04197
      Location:1 → 790
      Birna_RdRp; Birnavirus RNA dependent RNA polymerase (VP1)
    Nucleotide Protein
    Heading Accession and Version

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