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    AMQ98_gp1 putative replication initiation protein [ Hermit crab associated circular genome ]

    Gene ID: 25479218, updated on 17-Aug-2018

    Summary

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    Gene symbol
    AMQ98_gp1
    Gene description
    putative replication initiation protein
    Locus tag
    AMQ98_gp1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Hermit crab associated circular genome (isolate: I0085b, nat-host: hermit Crab)
    Lineage
    Viruses; ssDNA viruses; Circoviridae; unclassified Circoviridae
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    Genomic context

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    Sequence:
    NC_027790.1 (38..904)

    NC_027790.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_027790.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Novel circular single-stranded DNA viruses identified in marine invertebrates reveal high sequence diversity and consistent predicted intrinsic disorder patterns within putative structural proteins. Rosario K, et al. Front Microbiol, 2015. PMID 26217327, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    putative replication initiation protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_027790.1 Reference assembly

      Range
      38..904
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_009163917.1 putative replication initiation protein [Hermit crab associated circular genome]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0K1RL19
      Conserved Domains (3) summary
      cd00009
      Location:131 → 169
      AAA; The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, ...
      pfam00910
      Location:152 → 195
      RNA_helicase; RNA helicase
      pfam02407
      Location:3 → 84
      Viral_Rep; Putative viral replication protein
    Nucleotide Protein
    Heading Accession and Version

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